Gene Tery_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3435 
Symbol 
ID4243378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5253848 
End bp5254453 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content37% 
IMG OID638108411 
Productputative colanic acid biosynthesis acetyltransferase WcaF 
Protein accessionYP_723001 
Protein GI113476940 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.248973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA AACAACAAAC AGAATCTTGG GTCGATCTTC GCAAATACAA CCAATCTTGG 
TATGACCGAG GTAAACCAGG TTGGTTTGTA TTGCTGTGGT GGTTAGTACA AGCAATTATT
TTTCCCTTAA CTCCTCAGCC TTTATATGGT GTGAGACGAC TAATATTAAA TCTTTTTGGA
GCTAGAATAG GTCAAGGAGT TTTAATTCGC CCTACTGCCA GATTTACTTA TCCTTGGAAA
ATAGTGATCG GTGATTATAG TTGGATCGGA GACGATGTAG TTTTATATAG TCTTGAGCGT
ATCGAAATAG GTAAGCATTG TATTATATCT CAAAAAAGTT ACCTTTGTAC TGGTAGTCAT
AATATAGAAG ACCCTACATT TGGTTTACAA ACAGCAGGTA TTACTATTGG CAATGGTACT
TGGGTAGCAG CAGATTGTTT TGTTGGCCTT GGTGTTAAAA TTGGTGCTAA TGCAGTTATT
GGTGCTAGGA GTAGTGTTTT TAAAGATATG CCTCCAGGCC AAGTTTGTTT AGGAACACCT
TGTGAACCTC GTTACCAAAG AAAAATTAAA GATATAGGAA GGAAGGAGTT AGAAGTTAGA
AGTTAG
 
Protein sequence
MTNKQQTESW VDLRKYNQSW YDRGKPGWFV LLWWLVQAII FPLTPQPLYG VRRLILNLFG 
ARIGQGVLIR PTARFTYPWK IVIGDYSWIG DDVVLYSLER IEIGKHCIIS QKSYLCTGSH
NIEDPTFGLQ TAGITIGNGT WVAADCFVGL GVKIGANAVI GARSSVFKDM PPGQVCLGTP
CEPRYQRKIK DIGRKELEVR S