Gene Tery_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3434 
Symbol 
ID4243377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5252486 
End bp5253415 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content34% 
IMG OID638108410 
Productglycosyl transferase family protein 
Protein accessionYP_723000 
Protein GI113476939 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.134306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.508878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCAC CTAAGATACC AGTATCAGTT CTAATTCCTG CTAAGAATGA AGAGAAAAAT 
TTACCTGCTT GTCTAGAAAG TGTAGCAATA GCAGATGAAA TATTTGTGGT AGATTCTCAA
AGTAGTGATC AGTCTACTGA AATAGTTGAA AGTTATGGAG CAAATTTAGT ACAGTTTCAT
TTTAATGGAA CTTGGCCGAA AAAGAAAAAT TGGTCTTTGG AGAATTTACA ATTTCGGAAC
GAGTGGGTAT TAATAGTTGA TTGTGATGAA CGTATTACTT CAAAACTTTG GGATGAAATT
GATAGAGCAA TTCAGGATCC AAATTATAAT GGTTATTATA TCAACCGGAA AGTATTTTTT
CTAGGCAAAT GGATTCGTCA TGGAGGGAAA TATCCTGATT GGAACCTCAG ATTATTTAAA
CACAAAGAAG GTCGCTACGA AAACCTAAAA ACTGAGAGTG TGCAGAATAT TGGGGATAAT
GAGGTACATG AACACGTTAT TTTAACTGGC AATGCAGGCT ATTTAAAAAA TGATATGCTT
CACGAAGATT TTCGTGATTT ATTTTGCTGG ATCGAAAGAC ATAACCGTTA TTCTAATTGG
GAAGCGCAGG TATATTACAA TGTACTAACT GGTCAAGGTG ATAATGAAAC TATTGGCGGT
AGTTTATTTG GAGATGCAGT AAAGCGCAAG CGTTTTCTCA AAAAAATATG GGTGAGACTA
CCATTTAAAC CTTTCTTGAG ATTTATTTTA TTCTATTTTA TTCAACTAGG ATTTTTGGAT
GGTAAAGCAG GATATATTTA TGGTAGGTTA TTGAGTCAAT ATGAGTATCA AATTGGTGTT
AAGCTTTATG AGCTTAAAGA CTGTAATGGT CAGTTGAATG TTGCTCAAAA GAAACGACAA
AATACTAATT CTGAACGAGT TAGTTGTTGA
 
Protein sequence
MISPKIPVSV LIPAKNEEKN LPACLESVAI ADEIFVVDSQ SSDQSTEIVE SYGANLVQFH 
FNGTWPKKKN WSLENLQFRN EWVLIVDCDE RITSKLWDEI DRAIQDPNYN GYYINRKVFF
LGKWIRHGGK YPDWNLRLFK HKEGRYENLK TESVQNIGDN EVHEHVILTG NAGYLKNDML
HEDFRDLFCW IERHNRYSNW EAQVYYNVLT GQGDNETIGG SLFGDAVKRK RFLKKIWVRL
PFKPFLRFIL FYFIQLGFLD GKAGYIYGRL LSQYEYQIGV KLYELKDCNG QLNVAQKKRQ
NTNSERVSC