Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3418 |
Symbol | |
ID | 4244455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5232414 |
End bp | 5233184 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638108398 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_722988 |
Protein GI | 113476927 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.391418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.142714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGTA TTGAAGGATT ATGGCCTCAT AATATTAGCC CCAATCAACT CGCAGTGTTA GAAAGAAAAT TGGTGCTTTG GTTGCGATCG CAGAATTTTA ACTCTGAGTT AACTTCTCAT TCGTTACAAA ATAAGTCTTC AGAGGAGTTG CAAAGTTTGA TGTTATCTGC AACTTTTGCT GGATGTGATT TTTTAGAGTT TAGAATTATG AGCAAAAATG TGGTTGAGGC AAATACAGAA GATTTATTGG ACTTAGCAAA TATTGCAGGT CTAAATCCTA CTAAAGATTT TGCTGGTGCT AAATTTAATG GTGTTAATTT ATGTGGTGTT GATTTAAGTG GGGTAAATCT ATATGCTGCT TATTTAAGAG GTGCAGATTT AAGTGATGCA GATTTGAGTG AAGCTAATCT TAGTCAAGTA AATTTGGGTG GTGCAGATTT GAGTGGTGCG TTGTTAAGTA ATGCCAATTT AACTGATGCA AACTTGTACC GTGTTAGTCT AGCTTTGGCT AATTTAAGTG GTGCTAATTT AAGTGGTGCT AATTTAAGTA ATGCCAATTT AAGTAATGCC AATTTAAGTA ATGCTAATTT AAGTAATGCC AATTTAAGTA ATGCTAATTT AAGTAATGCT GGATTAGTAT TAACAAATTT AAAAGGAACA AATTTTCAAC ATACAAAAGT AGAGAAAGCT AGGTTATGGC ATGATGCTAG TTTATCTGAG GGAATGAAGC AAAACTTAAT TAGTCGTGGA GTAGTATTTG AGAATGATTA G
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Protein sequence | MSGIEGLWPH NISPNQLAVL ERKLVLWLRS QNFNSELTSH SLQNKSSEEL QSLMLSATFA GCDFLEFRIM SKNVVEANTE DLLDLANIAG LNPTKDFAGA KFNGVNLCGV DLSGVNLYAA YLRGADLSDA DLSEANLSQV NLGGADLSGA LLSNANLTDA NLYRVSLALA NLSGANLSGA NLSNANLSNA NLSNANLSNA NLSNANLSNA GLVLTNLKGT NFQHTKVEKA RLWHDASLSE GMKQNLISRG VVFEND
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