Gene Tery_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3418 
Symbol 
ID4244455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5232414 
End bp5233184 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content33% 
IMG OID638108398 
Productpentapeptide repeat-containing protein 
Protein accessionYP_722988 
Protein GI113476927 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.391418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.142714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTA TTGAAGGATT ATGGCCTCAT AATATTAGCC CCAATCAACT CGCAGTGTTA 
GAAAGAAAAT TGGTGCTTTG GTTGCGATCG CAGAATTTTA ACTCTGAGTT AACTTCTCAT
TCGTTACAAA ATAAGTCTTC AGAGGAGTTG CAAAGTTTGA TGTTATCTGC AACTTTTGCT
GGATGTGATT TTTTAGAGTT TAGAATTATG AGCAAAAATG TGGTTGAGGC AAATACAGAA
GATTTATTGG ACTTAGCAAA TATTGCAGGT CTAAATCCTA CTAAAGATTT TGCTGGTGCT
AAATTTAATG GTGTTAATTT ATGTGGTGTT GATTTAAGTG GGGTAAATCT ATATGCTGCT
TATTTAAGAG GTGCAGATTT AAGTGATGCA GATTTGAGTG AAGCTAATCT TAGTCAAGTA
AATTTGGGTG GTGCAGATTT GAGTGGTGCG TTGTTAAGTA ATGCCAATTT AACTGATGCA
AACTTGTACC GTGTTAGTCT AGCTTTGGCT AATTTAAGTG GTGCTAATTT AAGTGGTGCT
AATTTAAGTA ATGCCAATTT AAGTAATGCC AATTTAAGTA ATGCTAATTT AAGTAATGCC
AATTTAAGTA ATGCTAATTT AAGTAATGCT GGATTAGTAT TAACAAATTT AAAAGGAACA
AATTTTCAAC ATACAAAAGT AGAGAAAGCT AGGTTATGGC ATGATGCTAG TTTATCTGAG
GGAATGAAGC AAAACTTAAT TAGTCGTGGA GTAGTATTTG AGAATGATTA G
 
Protein sequence
MSGIEGLWPH NISPNQLAVL ERKLVLWLRS QNFNSELTSH SLQNKSSEEL QSLMLSATFA 
GCDFLEFRIM SKNVVEANTE DLLDLANIAG LNPTKDFAGA KFNGVNLCGV DLSGVNLYAA
YLRGADLSDA DLSEANLSQV NLGGADLSGA LLSNANLTDA NLYRVSLALA NLSGANLSGA
NLSNANLSNA NLSNANLSNA NLSNANLSNA GLVLTNLKGT NFQHTKVEKA RLWHDASLSE
GMKQNLISRG VVFEND