Gene Tery_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3408 
Symbol 
ID4244445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5218020 
End bp5219663 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content39% 
IMG OID638108392 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_722982 
Protein GI113476921 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2931] RTX toxins and related Ca2+-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.230394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAA TAATTGGTAC TACAGAGTCC GAAAAACTAA TTGGTAGTCG AGATAGGGAA 
AAAATATTTG GCTTGGATGG TGATGACACC TTAGAAGGTC GTCAGGGTTT TGACCATCTC
TTTGGCGGAG ATGGTAATGA TGTCTTAATA GGTGGTCAAG GTCGCGATCG CTTCAATGGG
GGTAGAGGAA ATGATACCCT CACTGGTAAT GCCAGTAAAG ACTTTTTTAT CTTTGATGCT
AAAGAAGATA TTGATTTTCA GGCCCTTGGT GTCGATACAA TTACAGATTT TGTTCCCGAT
CAAGATACAA TTATCCTTGC TAAAAGAAAA TTTACAAAAA TTTCCAGTGA TGCTGGAAGT
GGGTTTAGTA TTGACAATGA ATTTGACACT GTGACCGATA ATGCTGCAAC TTCTGACGCT
ATAATTGTCT ACGATAGCAC GACTGGTCAG CTATTCTATA ATGCTAATGG TAGTGAAGAA
GGTTTTGGAG ATGGCGGTCA ATTTGCAATT CTTGAAAATC TACCAGACCT AAAAGCTGAA
GACTTCAAAT TAAGAGCTCA TCCTACAGCA GAACCAGAAC CAGAACCAGA ACCAGAATTT
GAAGTTTCTA TCGACAAAGT TAGTGTAGTT GAAGGGGATG CCGGGACTAC AGACGCAACT
TTTACCGTTA ATCTCAATGA TCCTAGTGAA CAGACTATTG AAGTTGCTTA TGATACAGAC
CCTAGTGGTA TCTTTAAACT AGCAGTTGTT ATACCTGATG AAGCTATAGC AGGGCAAGAT
TATGAAGTTA CCAGAGGTGT GTTAACATTT AATCCTGGTG AAACAACAAA AACTTTTACA
GTACCTATTA TTGGTGATAC ACAGCAAGAG TTAGATGAAT TTTTCACTGT TTATCTACTG
GACCCTACTA CTATCAACAC CGATAGTCCT AACATATTAA CAACAACAAA AGGGATAATT
GAAAATGATG ATGCTGAGAT TACAAATAAT GTAATTAAAT TTACTCCCTC AAGTACAGAA
GAAGAGATAA AAGCTCAAAA TGGACCTAGT ATTGAGCTCG TCGACGGCCA AACTATTTAT
ATTGGTACTT GGCAAAGAAC GGTTAACAAC CAAGATCCCA TTATTGCTAG CTTCGATCCA
ATAAACCCCA CTAATAACTG GGTGCGAACA GATTATGAAA CCACTGGAGC AGACGGTAGA
GGTCGTGGTT TATTCTGGGA TGGAGAGGAC TTATATGCAG TTTTTAGCGT TGACGGTACT
CAGGGAACTC CAGAACAGGA CTTTCGCCGT GCTGCTACTG ATGCTGTACA GCCTTGGCTA
CGCAGTTATG GTCAAGGTGG TGGTGCAAGT GTAAGTGTTG TTGCCAGGAT AGATATAGAT
GATTTAACTA ACCCAGGAGA AATGACAGAT GCAGCATATT TTACAGCACT TTTGAGCAAT
GGTAATAGTA ATACATTGAA AGTTACTGAT CTATCTATTA ATTCTGATAA TAATCTAATT
GTAGAAGCTG ACTCTTTCTT TTCACCGCGC AACCCTGATG GTAGTCGGAT TGAAATACCA
TCTGGTTTGT CTTCACCATT TGATTATAGA TTAGTAATTA CACCTGACTT AAATGAAGTT
CTTGACAGTG AAGTTATTTT TTAG
 
Protein sequence
MKPIIGTTES EKLIGSRDRE KIFGLDGDDT LEGRQGFDHL FGGDGNDVLI GGQGRDRFNG 
GRGNDTLTGN ASKDFFIFDA KEDIDFQALG VDTITDFVPD QDTIILAKRK FTKISSDAGS
GFSIDNEFDT VTDNAATSDA IIVYDSTTGQ LFYNANGSEE GFGDGGQFAI LENLPDLKAE
DFKLRAHPTA EPEPEPEPEF EVSIDKVSVV EGDAGTTDAT FTVNLNDPSE QTIEVAYDTD
PSGIFKLAVV IPDEAIAGQD YEVTRGVLTF NPGETTKTFT VPIIGDTQQE LDEFFTVYLL
DPTTINTDSP NILTTTKGII ENDDAEITNN VIKFTPSSTE EEIKAQNGPS IELVDGQTIY
IGTWQRTVNN QDPIIASFDP INPTNNWVRT DYETTGADGR GRGLFWDGED LYAVFSVDGT
QGTPEQDFRR AATDAVQPWL RSYGQGGGAS VSVVARIDID DLTNPGEMTD AAYFTALLSN
GNSNTLKVTD LSINSDNNLI VEADSFFSPR NPDGSRIEIP SGLSSPFDYR LVITPDLNEV
LDSEVIF