| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3406 |
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| Symbol | |
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| ID | 4244443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5214314 |
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| End bp | 5215996 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638108390 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_722980 |
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| Protein GI | 113476919 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.210868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG AAGTATGGAC ATTGATTTTT GTGGCTGTTT CCTTTACAGG TTATCTCTAT
ATTGGATGGC GATCGCGAGT CAAAGATAGT AAAGGTTTTT TTGTAGCGGA CCAAAGTGTA
CCTGCTATTG CTAATGGTGC TGCTACTGGA GCGGACTGGA TGTCTGCGGC CTCATTTATT
TCAATGGCAG GGTTAATTTC TTTTTTAGGT TATGATGGTT CGATCTATCT TATGGGATGG
ACTGGTGGTT ATGTACTATT AGCATTACTA CTCGCTCCAT ACCTGCGGAA GTTTGGCAAA
TATACAGTAC CTGACTTTGT AGGCGATCGC TACTACTCAA ATGTTGCCCG TATAGTTGCA
GTTATCGCTG CTATCTTCGT ATCAATGACT TACGTTGCGG GGCAAATGCG GGGTGTTGGT
ATTGTCTTCA GTCGGTTTTT ACAAGTTGAC ATTGGTACCG GCGTTTTCAT TGGGATGATT
ATAGTTGCTT TTTTTGCCAT CTTAGGTGGG ATGAAAGGTA TCACTTGGAC TCAGGTTGCC
CAATATACTG TACTTATTAT TGCTTATCTG ATTCCAGCTA TTGCTATTGC TACAGTTATT
ACTGGTATTC CTATACCTCA ATTTGCTTTT ACTTTCAGCG ATATTGTGGA AAAACTCAAT
CAAGTTCAGG TAGATTTGGG TTTTGCAGAA TATACCGCAG CTTTTAGCAA CAAAACTATG
CTTGATGTTT TGTTTATCAC TATTGCGTTG ATGGTGGGAA CTGCTGGTTT ACCTCATGTT
ATTGTTCGCT TTTACACCGT GCCTGATGTA AGAGCTGCCA GATATTCTGC CGGTTGGGCA
TTATTATTTA TTGCTATTTT GTATACAACT GCTCCTGCCT TAGCTACTTT TGCGCGATAC
AACTTAATTG ATAGTTTACA CGATAAAACT GTGGAGGAAG TTCAACAGTT AAACTGGGCG
ACAAAGTGGG AAAATACGGG TTTGTTAGAA TTTACTGATA AAAATAATGA TGGTCGCTTT
CAACTCACCC CAGATAAAGA AACTAATGAA ATTAAAATAG ACCGGGATAT TATTGTTTTG
TCTACCCCAG AAGTAGCTAA ACTTGCTCCT TGGGTAATTG CTTTAGTAGC AGCGGGAGGC
TTGGCTGCTG CTTTGTCTAC AGCATCAGGT TTGTTGTTGG TAATTTCTAG TTCCATTGCC
CATGATGTTT ACTATCGAAT GATCGATCCA GGAGCACCGG AGTCACGACG GTTAATTGTA
GGACGGATGA TGGTAGGATT TTCTATTGCT ATTGCTGGTT ACTTTGGGGT TAACCCACCA
GGGTTTGTTG CTCAGGTGGT AGCTTTTGCT TTTGGTTTGG CTGCAGCTAG TTTTTTCCCG
GTGATTATTT TAGGTGTTTT TGATAAACGC ACTAACCGGG AAGGAGCGAT CGCTGGTATG
GTAGTAGGTT TATTGTTTAC TACTATTTAT ATTGTAGGTG TCAAGTTTGC GGGAATGCCG
ACATGGTTTT TCGGGGTTTC TGCTGAAGGT ATTGGCACTG TGGGGATGGC GTTAAATTTT
ATTGTGACTT TTATAGTATC TCGGATGACA CCTCCTCCAC CTTTGGAAAT ACAAGAGATG
GTAGAGAATT TACGATCGCC TCTAGCTGTG GCTGTTCCCA TTAGGGATAT TGGTGAGGAA
TAG
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| Protein sequence | MSAEVWTLIF VAVSFTGYLY IGWRSRVKDS KGFFVADQSV PAIANGAATG ADWMSAASFI
SMAGLISFLG YDGSIYLMGW TGGYVLLALL LAPYLRKFGK YTVPDFVGDR YYSNVARIVA
VIAAIFVSMT YVAGQMRGVG IVFSRFLQVD IGTGVFIGMI IVAFFAILGG MKGITWTQVA
QYTVLIIAYL IPAIAIATVI TGIPIPQFAF TFSDIVEKLN QVQVDLGFAE YTAAFSNKTM
LDVLFITIAL MVGTAGLPHV IVRFYTVPDV RAARYSAGWA LLFIAILYTT APALATFARY
NLIDSLHDKT VEEVQQLNWA TKWENTGLLE FTDKNNDGRF QLTPDKETNE IKIDRDIIVL
STPEVAKLAP WVIALVAAGG LAAALSTASG LLLVISSSIA HDVYYRMIDP GAPESRRLIV
GRMMVGFSIA IAGYFGVNPP GFVAQVVAFA FGLAAASFFP VIILGVFDKR TNREGAIAGM
VVGLLFTTIY IVGVKFAGMP TWFFGVSAEG IGTVGMALNF IVTFIVSRMT PPPPLEIQEM
VENLRSPLAV AVPIRDIGEE
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