| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3396 |
|---|
| Symbol | |
|---|
| ID | 4244433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5202425 |
|---|
| End bp | 5203063 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638108380 |
|---|
| Product | microcompartments protein |
|---|
| Protein accession | YP_722970 |
|---|
| Protein GI | 113476909 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.455594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.211927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGTATAG AACTGCGCAG TTATGTATTT ATAGACAACT TGCAACCTCA GCACGCCGCC
TATATTGGTA CAGTAGCCCT TGGCTTTTTA CCACTACCAG GTGATACCTC TCTATGGATA
GAAATTTCTC CTGGTATTGA AATTAATCGT ATTACAGATG TAGCTCTCAA ATCTAACTCT
GTGCGACCAG GGGTACAATT TGTGGAGCGA CTTTATGGTT TGTTGGAAAT TCATTCCAGT
CGTCAGGGAG ATACAAAAGC TGCTGGTCAA GCAATTTTGC AATCTTTAGA GGTTATTGAA
AGCGATCGCC TGAAACCTCG TATTATCTCT AGTCAGGTGA TCCGTAATAT TGACTCTCAC
CAAGCACAGT TAATTAATCG TAATCGTCGT GGCCAAATGA TTTTAGGTGG CCAAACTCTC
TATGTTTTAG AAGTCCAACC TGCCGCCTAT GCTGCTTTAG CAGCCAATGA AGCAGAAAAA
GCTGCTTTAA TTAATATTTT ACAAATTCAA GCCGTAGGTA GTTTTGGACG ACTTTATTTG
GGAGGAGAAG AACGGGATAT TTTGGCAGGT TCTCAAGCAG CTTTGGAGGC CATGAAAAAT
GTTTCGGGTC GAGAACATTT TGACCAACGC CAAGAATAA
|
|---|
| Protein sequence | MGIELRSYVF IDNLQPQHAA YIGTVALGFL PLPGDTSLWI EISPGIEINR ITDVALKSNS
VRPGVQFVER LYGLLEIHSS RQGDTKAAGQ AILQSLEVIE SDRLKPRIIS SQVIRNIDSH
QAQLINRNRR GQMILGGQTL YVLEVQPAAY AALAANEAEK AALINILQIQ AVGSFGRLYL
GGEERDILAG SQAALEAMKN VSGREHFDQR QE
|
|---|
| |