| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3394 |
|---|
| Symbol | |
|---|
| ID | 4244431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5199678 |
|---|
| End bp | 5201405 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638108378 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_722968 |
|---|
| Protein GI | 113476907 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.232814 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGAC TGGAAAATAT AAGTAAGATA TATCCTACAG GTGTCATTCT TAAAGATGTT
AACTGGGAAG TAAAACCAGG AGACCGCATT GGCTTAGTGG GTGTTAATGG AGCTGGAAAA
TCAACTCAAT TAAAAATTAT TACTGGAGAA ATAGAACCTA CTTCTGGAGA AGTTATTCGC
CCTGCAAATT TACACATTGC TTATCTAACT CAAGAATTTG AAGTAAATCC TAATCGTACA
GTTAGAGAGG AATTTTGGAC CGTATTTATA GAGGCTAATA AAATACACGA ATCTCTTCTA
CAAGTACAGA GAGAAATGGA AATTGCTACT CCAGAAAAAT TAGATGAACT TATTCATAAA
TTAGACCGTT TACAACGACA ATTTGAAGCT TTAAATGGTT ATGGATTAGA TGCAGAAATT
GAAAAAATAT TGCCCGAAAT GGGGTTTGAA TCTGATGATG GCGATCGCTT AGTTAGTGCT
TTTAGTGGTG GTTGGCAAAT GCGGATGAGT TTAGGAAAAA TTCTTTTGCA AAAGCCAGAT
GTATTACTCT TAGATGAACC GACTAACCAT CTAGATTTAG AAACAATTGA GTGGCTAGAA
AATTATTTAA AAAATTTAGC AACTCCTATG GTGATAGTTT CCCATGACAG AGAATTTCTT
GACCGCCTTT GTACTCAAAT TGTGGAAACT GAAAGAGGAG TTTCTACCAC TTATTTAGGT
AATTATTCAA CTTATTTAGA ACAAAAATCA GAAAATAAAG CTGCACAACT TAGCACTTAT
GAACGACAAC AAAAAGAAAT AGAAAAACAA CAAACTTTTA TAGAACACTT TCGTGCTAGT
GCTACTCGTA GTACTCAAGC AAAAAGCAGA GAAAAACAAT TAGAAAAAAT AGAACTTATA
GAAGCTCCTA CAGTAGGATT AAAAACTTTA ACTTTCCATT TTCCACCAGC ACCTCGTAGT
GGTAGAGAAG TTGCAGTCAT TAAAGATTTA GTTCATACTT ATGGTGATAA AATTCTCTTT
TTAGGAGCAA ACTTAGAAAT AGAAAGGGGA GATAGAATTG CTTTTTTAGG GTTGAATGGC
TGTGGTAAAT CTACTTTACT TCGGATGATT ATGGGATTAG AAAAACCCAC AGAAGGTATA
GTAGAATTAG GTAAATATAA TGTTATACCT AGTTACTTTG AGCAAAACCA AGCAGAAGCT
TTAGACTTAA CAAAAACTGT GATAAACATT ATCCATGATG AAGTGCCAGA TTGGAAAAAT
GAAGAAGTAA GAACTTTACT TGGTAATTTC TTGTTTAGTG GTGATACAGT ATTTAAAAAA
GTAGCTGCTT TGAGTGGTGG AGAAAAAGCA CGTTTAGCTT TAGCAAAAAT GCTTCTTAAA
CCAGGAAATT TTATGTTATT AGATGAGCCG ACAAATCATC TAGATATTCC AGCAAAGGAA
ATGTTGGAAT CAGCACTAAA AAATTATGAT GGAACTGTAA TTATTGTTTC CCACGACCGT
TACTTTATCT CTCAAGTAGC TAACAAAATT GTAGAAATCA GAGATGGTGA ATTTTATACT
TACTTAGGAG ACTATCATTA TTATATAGAT AAACTTGAGT CAGAAAAAGA ATTAGAAAGG
TTAGCAAAAA TAACTGCAGA AAAAGCTGCT AAAAAAGCTC AAAAAGCTGC TAAGAAAAAA
CAGAAAAAAA AGAAAGTAAA AAATCAAACA CCCCCTGAAA AATCCTAA
|
|---|
| Protein sequence | MLRLENISKI YPTGVILKDV NWEVKPGDRI GLVGVNGAGK STQLKIITGE IEPTSGEVIR
PANLHIAYLT QEFEVNPNRT VREEFWTVFI EANKIHESLL QVQREMEIAT PEKLDELIHK
LDRLQRQFEA LNGYGLDAEI EKILPEMGFE SDDGDRLVSA FSGGWQMRMS LGKILLQKPD
VLLLDEPTNH LDLETIEWLE NYLKNLATPM VIVSHDREFL DRLCTQIVET ERGVSTTYLG
NYSTYLEQKS ENKAAQLSTY ERQQKEIEKQ QTFIEHFRAS ATRSTQAKSR EKQLEKIELI
EAPTVGLKTL TFHFPPAPRS GREVAVIKDL VHTYGDKILF LGANLEIERG DRIAFLGLNG
CGKSTLLRMI MGLEKPTEGI VELGKYNVIP SYFEQNQAEA LDLTKTVINI IHDEVPDWKN
EEVRTLLGNF LFSGDTVFKK VAALSGGEKA RLALAKMLLK PGNFMLLDEP TNHLDIPAKE
MLESALKNYD GTVIIVSHDR YFISQVANKI VEIRDGEFYT YLGDYHYYID KLESEKELER
LAKITAEKAA KKAQKAAKKK QKKKKVKNQT PPEKS
|
|---|
| |