Gene Tery_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3377 
Symbol 
ID4243472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5176866 
End bp5177915 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content39% 
IMG OID638108362 
Productextracellular solute-binding protein 
Protein accessionYP_722952 
Protein GI113476891 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.977933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTA CTAGACGAGT ATTTCTAGGA ACAGGGACAG CAATAGCAAC AGTGGCGATC 
GCTGAACTGG GAAAAAGCAA TCGAGGATTA GCTCAAAGCG GTGCAATTAA TCTCTATTCT
TCTCGCCACT ACGATACTGA CCAAGCTCTT TACGACAGTT TTACTAAAAA AACTGGTTTG
AAAGTTAATT TAATTGAAGG TAAAGGAGAT AAGTTAATCG AACGAATTAA AAGTGAGGGA
GCTAATAGTC CAGCAGATGT GTTTATGACA GTTGATGCAG GTCGTCTGTG GCGTGCTCAA
GAAGCTGGAA TTTTGCAACC TATTTCTTCC TCTACTCTTA ATAATAAAAT TCCAGCTAAC
CTCCGCAGCC CGGAAAAATT ATGGTTTGGT TTCTCCAAAC GGGCGAGGGT AATTATGTAT
AATAAAAATA AGGTTCAACC TTCTGAGCTA TCAACTTATG AAGATTTAGC TCAAAACAAA
TGGAAAGGGA AAATTGTAAT CCGCTCTTCT AGCAATATTT ACAACCAATC TCTAATAGCA
TCTTTAATCG AAATTCACGG AATGTCAGAT GCCGAAGGTT GGGCAAAAGG TTTTGTTCGT
AACTTTGCCA GACCTCCAGA AGGAAATGAT ACTGCTCAAA TAAAGGCTGT TGCGGCTGGC
ATTGGTGATA TTGGTCTTGC CAATAGCTAC TACTTAGCGC GTTTGAAAAG ATCTTCTAAA
CCAGAAGATC AAGCAGTTGC AGACAAAGTT GGTATGTTTT TCCCAAACCA AAATGGGCGT
GGTACCCATG TTAATATTAG TGGTGGTGGT GTAGTTAAAA ATGCTCCAAA TAAAGAAGGT
GCTATTAAGT TTCTTGAATA TTTAGTCAGT CCAGAAGCTC AAAAAATCTT CTCTGAGGGT
AATAACGAAT ATCCTGTAGT TGCAGGTGTA CCTATTGCTA GCGTTTTGAA ACCCTTTGGT
AGTTTCAAAA ATGATTCTAC CAATGTTTCT GTTTATGGTA AGTTGAATGC TGACGCGATT
AAATTAATGG ATCGTGTAGG CTGGAAGTAA
 
Protein sequence
MTITRRVFLG TGTAIATVAI AELGKSNRGL AQSGAINLYS SRHYDTDQAL YDSFTKKTGL 
KVNLIEGKGD KLIERIKSEG ANSPADVFMT VDAGRLWRAQ EAGILQPISS STLNNKIPAN
LRSPEKLWFG FSKRARVIMY NKNKVQPSEL STYEDLAQNK WKGKIVIRSS SNIYNQSLIA
SLIEIHGMSD AEGWAKGFVR NFARPPEGND TAQIKAVAAG IGDIGLANSY YLARLKRSSK
PEDQAVADKV GMFFPNQNGR GTHVNISGGG VVKNAPNKEG AIKFLEYLVS PEAQKIFSEG
NNEYPVVAGV PIASVLKPFG SFKNDSTNVS VYGKLNADAI KLMDRVGWK