| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3369 |
|---|
| Symbol | |
|---|
| ID | 4243464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5165518 |
|---|
| End bp | 5166480 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638108354 |
|---|
| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
|---|
| Protein accession | YP_722944 |
|---|
| Protein GI | 113476883 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.626473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATC TACTGTGGCT TCAAGGTGGA GCTTGTTCTG GCAATACCAT ATCATTTCTC
AATGCTGAAG AACCAAATAT TTGTGATTTA ATTACAGACT TCGGCATTAA TGTACTTTGG
CATCCTTCCC TAGGAATAGA ACTTGGTACA AATGTTCAAC AATTATTAAA AGATTGTATT
TCCGGAAAAA TACAATTAGA TATTTTAGTA TACGAAGGAA CAGTAATTAA CGCACCAAAT
GGTATGGGAG ATTGGAACCG TTTTGCCGAT CGGCCAATGA AAAACTGGGT AAAAGAATTA
GCAGAAATTG CCAGTTTCGT TGTTGCGGTA GGAGACTGCG CTACTTATGG CGGTATTCCG
GCAATGGCAC CAAACCCCAG TGAGTCTGAA GGTTTACAAT TTCTGAGACG GAAAAAAGGT
GGATTTTTAG GAGAAGACTT CAAAAGCCAA GCTGGATATC CTGTGATCAA CATTCCTGGT
TGCCCTGCAC ACCCAGATTG GATTTCGCAA ATATTGGTAG CAGTAGCCAC TGGCAGACTT
AATGACATTA CCTTAGACGA ATTTCACCGC CCTGAAACAT TTTTCAAAAG CTTCACTCAA
ACAGGTTGTA CTCGCAACGT TCACTTTGCT TACAAAGCTT CAACCTCAGA TTTTGGGCAA
CGTCAAGGAT GTCTATTTTA TGATTTAGGT TGTCGCGGAC CGATGACTCG TTCTTCCTGT
AACCGCATTT TGTGGAACCG AGTTTCTTCT AAAACTCGAG CGGGGATGCC ATGTTTAGGT
TGCACGGAAC CAGAATTTCC ATTCCAGGAT CTTATGCCTG GAACAGTATT TACAACTCAA
ACAGTTATGG GAGTGCCTAA AGAATTACCA ACAGGAGTTA ACCGTAAAGA TTATGCTGTA
TTGACTATGG TTGCTAAAAA TTCAACGCCA GCATGGGCAG AGGAAGATTT CTTTACAGTT
TAA
|
|---|
| Protein sequence | MINLLWLQGG ACSGNTISFL NAEEPNICDL ITDFGINVLW HPSLGIELGT NVQQLLKDCI
SGKIQLDILV YEGTVINAPN GMGDWNRFAD RPMKNWVKEL AEIASFVVAV GDCATYGGIP
AMAPNPSESE GLQFLRRKKG GFLGEDFKSQ AGYPVINIPG CPAHPDWISQ ILVAVATGRL
NDITLDEFHR PETFFKSFTQ TGCTRNVHFA YKASTSDFGQ RQGCLFYDLG CRGPMTRSSC
NRILWNRVSS KTRAGMPCLG CTEPEFPFQD LMPGTVFTTQ TVMGVPKELP TGVNRKDYAV
LTMVAKNSTP AWAEEDFFTV
|
|---|
| |