Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3358 |
Symbol | |
ID | 4243453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5152432 |
End bp | 5153325 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638108343 |
Product | hypothetical protein |
Protein accession | YP_722933 |
Protein GI | 113476872 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0130649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAGAAA AATTAGTTGA ACCATTACAA TATAGTTTTA TGCAGCGATC GCTCCTAGTA GCAATAATAG TTGGAATTAT TTGTGCAGTA GTAGGCAGTT ATTTAATGGT ACAAAGATTA GCTCTACTAG GAGATGCAAT TAGTCACTCA GTACTACCAG GATTAGCCAT TGCTTTTTGG GTTGGAGCAA ATATATTTAT CGGGGCATTT ATAGCCGGCA TAATTAGCAC AATTTTAATC AATCTAATTA GAACGCGATC GTCAATCAAA GAAGACGCAG CAATGGGCAT AGTTTTTTCA GCCTTCTTTG CTTTAGGAAT AACACTAATG ACAATTATTC AGAAAGACAA TAAAATCGAC CTCAATCATT TTTTATTCGG TAATATTCTA GGCGTAACCG TTGGAGACGT CCGCGATACA CTAATTATTG GTATAATTGT TTTATTAGTT GTAATCTTAC TTTATAAAGA ACTATTATTT TATACATTTG ATCCCCTCGG CGCTCAAGCA GTAGGTTTAC CTGTAAACTT ATTAAACCTA GGGCTAATGA TGTTAATTGG TTTAACAATT GTAGCAAGTC TTAAAGCAGT AGGAGTAGTA TTAGTTTTAT CCTTATTAAT CACACCAGCA TCTACAGCTT ATCTATTAGT CAAAAGACTT CACCAAGTAA TCATATTAGG AGTAGGAATA GGAACTTTAT CTAGTATTAG TGGGATGTAT ATTAGCTATT TCTATAACTT GCCATCTGGT CCAGCAATTG TATTAGTATC ATTTGGGTTA TTTATACTAG CTTTTTTGTT CAGCCCCACT CAGGGAATTT TCACTCATCC CCCATCAATT TCTAGTCAGC CCTCTATCTG GCGGGAGTTA AAAAGTTTAA TTAAGTCAAA TTAA
|
Protein sequence | MLEKLVEPLQ YSFMQRSLLV AIIVGIICAV VGSYLMVQRL ALLGDAISHS VLPGLAIAFW VGANIFIGAF IAGIISTILI NLIRTRSSIK EDAAMGIVFS AFFALGITLM TIIQKDNKID LNHFLFGNIL GVTVGDVRDT LIIGIIVLLV VILLYKELLF YTFDPLGAQA VGLPVNLLNL GLMMLIGLTI VASLKAVGVV LVLSLLITPA STAYLLVKRL HQVIILGVGI GTLSSISGMY ISYFYNLPSG PAIVLVSFGL FILAFLFSPT QGIFTHPPSI SSQPSIWREL KSLIKSN
|
| |