| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3314 |
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| Symbol | |
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| ID | 4243485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 5083976 |
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| End bp | 5087698 |
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| Gene Length | 3723 bp |
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| Protein Length | 1240 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638108300 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_722891 |
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| Protein GI | 113476830 |
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| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.689174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.286856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA CTAAAACTAA CATAGAAGAT AATGATATTA TAGCTATTTA TGAGCGGGCT
ATCGCGAATT ATCAATTAGC AAATTATCAG GATGCAATTG CTGATTATAG TAGAGTAATA
GAAATAAAAT CCAGTAATGC TGAACTCTAC TACAGTCGAG GGGTGGCCAA GCATCAAATG
GAAGATTATC AGGGTGCAAT TTCTGACTAC ACTGAAGCAA TTAAAATTGA CCCTAATAAC
AGCAGTGTCT ACAATAATCG TGGTATAGCT CTTTCTCAAA TAGGTCGTTA TCAGGACGCA
CTCACTGATG TAACTGAAGC ACTTCGACTG AACCCTAATG ATGCTGATAG CTATTACAAT
AGAGGTTTTG TATATGAGGC AACTTCAGAT TATGAAAAAG CTATTGCAGA TTACACACAA
GCTCTAACAA TTAATCCTAG TTATAACTTA GCCAATAAAA GGCGAGAGTA TATTACTACA
TTGATTAAAC CTCAGTCTGA ATCATCTGCC AATGAGACTT TGACACAAAC ACCTCAAACT
AATGTGGAAG AAGAAAAACC TCCAAAAGTA GCTTTAGAGG AGAATTTAAC ACAAACATCT
CAGACTAACA TTGAGATGCA AAAATCTTCA GGAATTGAGT CTGATGTAGA GGAGGAAAAA
CCTTCAAAAG TAGCCTTAGA AGAGACTTTA ATACAAACAT CTCAGACTAA TATTGAGATG
GAAAAATCTC AAGAAATTGA GTCTGATGTG GAAAAGCAAC AACAGTCTCC AGAAGCATTA
AAAACTTCGG AAAATTCAGC TCCTAACTTT CTGAAAAGGT GGTTAAATCC TTATTTACGT
AAGGGTACAT CAGTAGATGA AACTTTGCCA ACTACAACTC AGACTGATGT TGAAACTGAA
AAATCTTCAG AAATTCAGAC TGATGTTGAA ACTGAAAAAT CTTCAGAAAT TCAGACTGAT
GTTGAAACCG AAAAATCTTC AGAGCTGTCA GTAGATGAAA CTTTAGCAAC GACAACTCAG
ACTGATGTTG AAACCGAAAA ATCTTCAGAA ACTCAGACTG ATGTTGAAAC CGAAAAATCT
TCAGAGCTGT CAGTAGATGA AACTTTAGCA ACGACAACTC AGACTGATGT TGAAACCGAA
AAATCTTCAG AGGTATCAGT AGATGAAACT TTGGCAACGA CAACTCAGAC TGATGTTGAA
ACCGAAAAAT CTTCAGAGGT ATCAGTAGAT GAAACTTTAG CAACGACAAC TCAGACTGAT
GTTGAAACCG AAAAATCTTC AGAGGTATCA GTAGATGAAA CTTTGGCAAC GACAACTCAG
ACTAATGTTG AAACTGAAAG ATCTTCAGAA ACCCAGCCCC TTCTGAAAAG GCTTTTAAAT
CGTTATTTAC GGAGAGGTAT ACCAGTAGAT GAAACTTTGG CAACGACAAC TCAGACTGAT
GTTGAAACCA AAAAATCTCA AGAGGTATCA GTAGATGAAA CTTTAGCAAC GACAACTCAG
ACTGATGTTG AAGCTGAAAA ATCTCCAGAA ATTCAGGCTG ATGTTGATTC ACAGACATCT
TCAGAAGTAT CAGTAGATGA AAATTTAAAA ACTCAAACCC AGACTGATGT TGAAGCTGAA
AAATCTCCAG AAATTCAGGC TGATGTTGAT TCACAGACAT CTTCAGAGGT ACCAGTAGAT
GAAAATTTAA AAACTCAAAC CCAGACTGAT GTTGAATCTG AAAAATCTCC AGAAATTCAG
GCTGATGTTG ATTCACAGAC ATCTTCAGAG GTACCAGTAG ATGAAAATTT AGAAGCTCAA
ACCCAGACTG ATGTTGAATC TGAAAAATCT CCAGAAATTC AGGCTGATGT TGATTCACAG
ACATCTTCAG AAGTATCAGT AGATGAAAAT TTAGAAACTC AAACTCAGAC TGATGTTGAA
TCTGAAAAAT CTCCAGAAAT TCAGGCTGAT GTTGATTCAC AGACATCTTC AGAGGTACCA
GTAGATGAAA ATTTAAAAAC TCAAACCCAG ACTGATGTTG AAGCTGAAAA ATCTCCAGAA
ATTCAGGCTG ATGTTGATTC ACAGACATCT TCAGAAGTAT CAGTAGATGA AAATTTAGAA
ACTCAAACCC AGACTGATGT TGAAGCTGAA AAATCTCCAG AAATTCAGGC TGATGTTGAT
TCACAGACAT CTTCAGAAGT ATCAGTAGAT GAAAATTTAG AAACTCAAAC CCAGACTGAT
GTTGAAGCTG AAAAATCTCC AGAAATTCAG GCTGATGTTG ATTCACAGAC ATCTTCAGAA
GTATCAGTAG ATGAAAATTT AGAAACTCAA ACCCAGACTG ATGTTGAAGC TGAAAAATCT
CCAGAAATTC AGGCTGATGT TGATTCACAG ACATCTTCAG AGGTACCAGT AGATGAAAAT
TTAGAAACTC AAACCCAGAC TGATGTTGAA GCTGAAAAAT CTCCAGAAAT TCAGGCTGAT
GTTGATTCAC AGACATCTTC AGAGGTACCA GTAGATGAAA ATTTAAAAAC TCCAACCCAG
ACTGATGTTG AATCTGAAAA ATCTCCAGAA ATTCAGGCTG ATGTTGATTC ACAGACATCT
TCAGAGGTAC CAGTAGATGA AAATTTAAAA ACTCCAACCC AGACTGATGT TGAATCTGAA
AAATCTCCAG AAATTCAGGC TGATGTTGAT TCACAGACAT CTTCAGAGGT ACCAGTAGAT
GAAAATTTAA AAACTCAAAC CCAGACTGAT GTTGAATCTG AAAAATCTCC AGAAATTCAG
GCTGATGTTG ATTCACAGAC ATCTTCAGAA GTATCAGTAG ATGAAAATTT AGAAACTCAA
ACTCAGACTG ATGTTGAATC TGAAAAATCT CCAGAAATTC AGGCTGATGT TGATTCACAG
ACATCTTCAG AGGTACCAGT AGATGAAAAT TTAGCAATAA ATACTCAAGG CAAAATTACT
GATTTTAAGC ATAGTAATGC TGACTACCAA CAAGAAAAAA CTTTGTCTCA AAAAGATACA
CAAGAGACTA TCCAAAGCTT AACTGAAGAA CTTCAACTAC ATCCAAATCA GGCTCATATA
TACTACCAGC GAGGGGAAAT ATTCTTTCAA CATAAAAATT ATCAGGAGGC GAAAGCTGAC
TTTACTGAAG CTCTCCAACT TAATCCTGAT GAAGCCATCT ATTTCAATAA AAGGGGCATT
GCTCGTTCCT GTTTAGAAGA TTATCAGGGG GGACTTGATG ATTTTACTGC TGCGATTACA
ATTAATCCCA CTAACCTTGA TGCTTGTAGC AACAGAGGAT ATCTTTACTA TAGTGTCATC
AAAGATTACA AACTTGCTAT TGAAGATTTT ACTACAGTCA TACAAGCTAA TCCTAAAGAT
GTAGATGCTT ATAATTATCG AGGTATTTGT CTTTATGAAA TTCAAGAGTT TTATGGAGCA
ATAGCTGATT TTACTGAAGC CATTAAAATT AATCCTAAAG ATGCAAATAC TTATTATCAT
CGAGCTATTT CTAATTATAA AATAGGGGAT AATCAACAGG CAATAGATGA TTGTACAGAA
GCAATTAAAC TTGAACCTAC AGATGCAAGA TATTATCGTA ATCGCGCTAT GCTTCGTTAT
GACACTGAAG ATAATCAGGG GGGACTAGAT GACCTTCAAA AAGCTGCTGA TATATATCAA
AAACAAGGTC AAAATGATGA TTATCAAGAA GTAATAAAAA TGATGAGAAA ATTAAAAAAA
TAA
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| Protein sequence | MENTKTNIED NDIIAIYERA IANYQLANYQ DAIADYSRVI EIKSSNAELY YSRGVAKHQM
EDYQGAISDY TEAIKIDPNN SSVYNNRGIA LSQIGRYQDA LTDVTEALRL NPNDADSYYN
RGFVYEATSD YEKAIADYTQ ALTINPSYNL ANKRREYITT LIKPQSESSA NETLTQTPQT
NVEEEKPPKV ALEENLTQTS QTNIEMQKSS GIESDVEEEK PSKVALEETL IQTSQTNIEM
EKSQEIESDV EKQQQSPEAL KTSENSAPNF LKRWLNPYLR KGTSVDETLP TTTQTDVETE
KSSEIQTDVE TEKSSEIQTD VETEKSSELS VDETLATTTQ TDVETEKSSE TQTDVETEKS
SELSVDETLA TTTQTDVETE KSSEVSVDET LATTTQTDVE TEKSSEVSVD ETLATTTQTD
VETEKSSEVS VDETLATTTQ TNVETERSSE TQPLLKRLLN RYLRRGIPVD ETLATTTQTD
VETKKSQEVS VDETLATTTQ TDVEAEKSPE IQADVDSQTS SEVSVDENLK TQTQTDVEAE
KSPEIQADVD SQTSSEVPVD ENLKTQTQTD VESEKSPEIQ ADVDSQTSSE VPVDENLEAQ
TQTDVESEKS PEIQADVDSQ TSSEVSVDEN LETQTQTDVE SEKSPEIQAD VDSQTSSEVP
VDENLKTQTQ TDVEAEKSPE IQADVDSQTS SEVSVDENLE TQTQTDVEAE KSPEIQADVD
SQTSSEVSVD ENLETQTQTD VEAEKSPEIQ ADVDSQTSSE VSVDENLETQ TQTDVEAEKS
PEIQADVDSQ TSSEVPVDEN LETQTQTDVE AEKSPEIQAD VDSQTSSEVP VDENLKTPTQ
TDVESEKSPE IQADVDSQTS SEVPVDENLK TPTQTDVESE KSPEIQADVD SQTSSEVPVD
ENLKTQTQTD VESEKSPEIQ ADVDSQTSSE VSVDENLETQ TQTDVESEKS PEIQADVDSQ
TSSEVPVDEN LAINTQGKIT DFKHSNADYQ QEKTLSQKDT QETIQSLTEE LQLHPNQAHI
YYQRGEIFFQ HKNYQEAKAD FTEALQLNPD EAIYFNKRGI ARSCLEDYQG GLDDFTAAIT
INPTNLDACS NRGYLYYSVI KDYKLAIEDF TTVIQANPKD VDAYNYRGIC LYEIQEFYGA
IADFTEAIKI NPKDANTYYH RAISNYKIGD NQQAIDDCTE AIKLEPTDAR YYRNRAMLRY
DTEDNQGGLD DLQKAADIYQ KQGQNDDYQE VIKMMRKLKK
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