| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3305 |
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| Symbol | |
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| ID | 4243611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5068307 |
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| End bp | 5070214 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108293 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_722884 |
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| Protein GI | 113476823 |
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| COG category | [L] Replication, recombination and repair
[V] Defense mechanisms |
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| COG ID | [COG1403] Restriction endonuclease
[COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00301539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATAAAG CTGAAATACT AAAAAGAAAA TTGGACAATC CAAGGCCCTT TTCAAGTGTG
GCATGGGACA CGTACGATAT ACCTAACCAG GTTTGTGTTA ATCCCAATCT CAAATGGAAA
GACATCAACT GGAAAAAGGT AGAAAAGTAT GTGTTTAAGT TACAAAAGTT AATCTATAGA
GCATCCAGCC GTGGCGAAAT CCGCAAAATG CGTAAATACC AAAAACTTCT GACCAAAAGT
TATTATGCAA GGTTGCTAGC TGTTAGGCGT GTGACTCAGG ACAACCAGGG AAAGAAAACT
GCTGGTATAG ATGGTATAAA AAGCCTTCCC CCAATGCAGA GGTTGAACCT GGTAGAAATG
TTAGGGTCAC GATTTCTTAA AGCAAGCCCA ACCCGTAGAG TCTGGATACC AAAACCAGGT
AGAGAAGAAA AACGTCCACT AGGCATACCC ACTATGTATG ATAGGGCACT TCAAGCACTG
GTAAAGTTAG GCATGGAACC AGAATGGGAA GCACTTTTTG AACCTAATAG TTATGGTTTT
AGACCAGGAC GGTCAACATA CGATGCTATT GCAGCAATCT ATGTCAGTAT TAACCACAAA
CCAAAATATG TTTTAGATGC TGACATATCC AAATGTTTTG ACCGAATTAA CCATGATGCA
CTGTTGGGAA AAATAGGAAA ATCCCCATAT AGAAAATTAG TTAAACAATG GCTAAAATCC
GGGGTATTTG ACAATAAACA ATTCTCAAAC ACTGTGGAAG GTACACCACA GGGAGGGGTA
ATATCACCCT TGCTAGCAAA CATCGCCCTA CACGGTATGG AAAAATGCCT AGAAGATTAT
GCAGAAACCC TCCCAGGGAC AAAGCGTGAT AATCAAAGAG CATTATCCTT AATACGATAT
GCCGATGACT TTGTAATCCT ACATAAAGAC ATCAAAGTAT TGTTACAAGC AAAAACTGTA
ATACAGGAAT GGTTAAACCA AGTAGGGTTA GAACTAAAAC CAGAAAAAAC CAAAATTGCC
CACACTCTGG AAGAATATGA AGGAAATAAA CCCGGATTTG ACTTTCTAGG ATTTACAATA
AGGCAATGGA AAGGTAAGAC AACCAAACAA GGATTCAAAA CACTGATTAA GCCATCATCT
AAGAGTATTA AAACTCATTA TCGGAAGCTG GCGGATATAG GTGACACCTA CAAAACCGTC
CCTACAAAAG CTCTAATAGC TAAACTTAAT CCGGTAATTA GAGGATGGGC CAACTACTTT
TCCACCGTAG TCAGTAAAGA GGTATATAAT AAATTAGACT ACCTTCTATG GGAAAGATTA
TGGAGATGGG CAAGTAGACG GCATCCAAAC AAGTCAGCCA AATGGGTCAA GAATAAGTAT
TTTCCTCGCT GCAAAGTCAC CAGAAACTGG TTACTTAACG ACGGCGAATA TATACTTAAC
CAACACTCAG ACGTTGCCAT AAAAAGGCAC GTCAAGGTAA AAGGCAATAA ATCCCCTTAT
GACGGTGATT GGACTTATTG GAGTAGTAGA ATCGGCAAAC ACCCAGGTGT AAGGAAAGAA
GTCACAACGC TGTTAAAACG GCAAAAGAAT AAATGCGCAT TTTGTGGACT AACCTTTAGA
TCAAATGACC TCATGGAAAT AGACCATATA AAACCAAAGT CTGAAGGCGG TGATAACTCA
ATTAAAAACA AGCAACTGTT ACACCGACAT TGCCACGATA CTAAAACTGC TTTAGATAAT
AAAACATACA CAAAACCTAA GTTACAGGAT TTACCTGATG AATATCTATG GGTAAATGAT
ATGTTAATTC TAAAACAGGG ATGTACCTAT GAAAAAGGAC GTTTAGGAGA GAAGCCGGAT
GAGGTGAAAG TCTCACGTCC GGTTTTGAAG ACGAGTCGGG TAAGGTAA
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| Protein sequence | MNKAEILKRK LDNPRPFSSV AWDTYDIPNQ VCVNPNLKWK DINWKKVEKY VFKLQKLIYR
ASSRGEIRKM RKYQKLLTKS YYARLLAVRR VTQDNQGKKT AGIDGIKSLP PMQRLNLVEM
LGSRFLKASP TRRVWIPKPG REEKRPLGIP TMYDRALQAL VKLGMEPEWE ALFEPNSYGF
RPGRSTYDAI AAIYVSINHK PKYVLDADIS KCFDRINHDA LLGKIGKSPY RKLVKQWLKS
GVFDNKQFSN TVEGTPQGGV ISPLLANIAL HGMEKCLEDY AETLPGTKRD NQRALSLIRY
ADDFVILHKD IKVLLQAKTV IQEWLNQVGL ELKPEKTKIA HTLEEYEGNK PGFDFLGFTI
RQWKGKTTKQ GFKTLIKPSS KSIKTHYRKL ADIGDTYKTV PTKALIAKLN PVIRGWANYF
STVVSKEVYN KLDYLLWERL WRWASRRHPN KSAKWVKNKY FPRCKVTRNW LLNDGEYILN
QHSDVAIKRH VKVKGNKSPY DGDWTYWSSR IGKHPGVRKE VTTLLKRQKN KCAFCGLTFR
SNDLMEIDHI KPKSEGGDNS IKNKQLLHRH CHDTKTALDN KTYTKPKLQD LPDEYLWVND
MLILKQGCTY EKGRLGEKPD EVKVSRPVLK TSRVR
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