| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3280 |
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| Symbol | |
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| ID | 4243586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5034589 |
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| End bp | 5035557 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108274 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_722865 |
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| Protein GI | 113476804 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.733793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.122087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTT TTGTTACTGG TGCCAGTGGT TTTATTGGGG CGAATTTAGT GCGGTTGTTA
TTACAGCAGG GTTATGCTGT GCGATCGCTA GTTCGCCCTA CAAGTCGTCT TGATAATCTT
CAGGGTTTAG ATATAGAAGT TGTAGTGGGA GACTTAAATG ACTCCTACTT GTTTGAGTTG
ATAGAGGGAT GTCAGGTTTT ATTCCATGTA GCTGCTCATT ATTCTTTGTG GCAAAAAGAT
AAAGAGTTAC TTTATAAAAA TAATGTTTTG GGTACACGCA ATGTTTTGGC CGCAGCACGA
CGGGCAAAAA TTGAGCGGAC AGTTTATACA AGTTCTGTTG CTGCTATTGG TGTGGGAGTT
TCTAGTACAG TCGTTGATGA AACTTATCAG TCTCCACTAA AGAAGTTGGT GGGAGATTAT
AAAAAGTCTA AGTTTTTGGC AGAACAAGAG GCGATGAGAG CAGTTACTCT TGGTCAAGAT
GTGGTAATTG TTAATCCTAC AGCTCCTGTT GGTGCTTGGG ATATTAAACC AACTCCGACG
GGTGATATTA TTGTTCGCTT TTTACGTCGG CAAATGCCTG TTTATGTGGA TACTGGTTTA
AATATTATAG ATGTTCGAGA CGTGGCATGG GGACATTTAT TAGCTTTGGA AAGAGGGAAA
AGTGGCGATC GCTATATTTT AGGTAATCAG AATTTGACTC TGAAGGAATT ACTTGATTTA
TTGCAGGAAG TTACAGGTTT ACCTGCTCCA AGACAAACTA TTCCTATATG GTTACCTTTA
ACTATCGCGT GGGTTGATGA AAAAATTCTT GCACCTTTGG GAAAACAACC TTCTATTCCC
TTAGATGGCG TGCGGATGTC TCAAAAAAAG ATGTATTATG ATGCTTCTAA GGCAATAAAA
AAATTGGGTT TGCCCCAGTC TTCAATTAGA GTTGCTCTTG AGAATGCTAT TAATTGGTTT
GACATTTAA
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| Protein sequence | MKAFVTGASG FIGANLVRLL LQQGYAVRSL VRPTSRLDNL QGLDIEVVVG DLNDSYLFEL
IEGCQVLFHV AAHYSLWQKD KELLYKNNVL GTRNVLAAAR RAKIERTVYT SSVAAIGVGV
SSTVVDETYQ SPLKKLVGDY KKSKFLAEQE AMRAVTLGQD VVIVNPTAPV GAWDIKPTPT
GDIIVRFLRR QMPVYVDTGL NIIDVRDVAW GHLLALERGK SGDRYILGNQ NLTLKELLDL
LQEVTGLPAP RQTIPIWLPL TIAWVDEKIL APLGKQPSIP LDGVRMSQKK MYYDASKAIK
KLGLPQSSIR VALENAINWF DI
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