Gene Tery_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3249 
Symbol 
ID4243670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4982580 
End bp4983797 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content37% 
IMG OID638108245 
Productresponse regulator receiver protein 
Protein accessionYP_722836 
Protein GI113476775 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.517316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGAA ATTTAAATGA AATTGATATC CGCAGCATCC TGCAACTTAT AGACTTAGGT 
CAGCGAACTG GTGAACTTTT TGTTAAGGCT TATAGCTCAC CAGTTAGTAG TAATATTGCT
GAACCCGAAA AGCACTTTCC CAAAGAAGCA TCTTGGTTTG TATTTTTTCT CAGTGGTCAG
ATTATCTACG CTACCCCAAG TGCAGGTAGT TTATTTCGTT TGAAAGACTA TTTACATCGC
TACAAAGCAG ATAGATATCT TGATACAATT AAGGTTCCTT CTGTTGCATC TGTCAATGCT
CCCGAGTATG GATACTTATG GGCTTTGCTA GAAAAGGGTC TGCTCACGCC AGCCCAGGGA
CGTAGTATCA TTAATAATAT GGTGTATGAA ACTCTATTTG ACTTACTAAG TCTTCGCCGA
GGAGCATTTA TTTTTGAGCT TGGGCCAGCA CTCACACCTC AGCTAACCAC TTTAGAAGTT
AGGTCATTGT TGGCAAAAAT TATGAAACAA ATACAGGAAT GGAATCAGTT TTCTCCTTAT
ATTCAATCTG TTGAACAGTG TCCAGTAATT TCAGTTCCAG CCCAGTTAAA GAAAGCATTA
AAACCGAGAA TATATAATAT TTTAAGTCAT TGGTCAGATG GCCAGACATC TATACAACAA
ATAGCTAGAT ATCTAAACAG AGATGTATTA ACAGTAGCCA AGGCCATTTA TCCTTTCGTA
CAAAAAGGTA TAGTGCAACT GCTAGATCAA TCTTCAGAAA CAAGCATGAT TAAGAAATCA
AAGCCATTAG AACGAGAAAC CAAAATTTGT AAAGTAGTAT GTATTGATGA TGATTTAGTG
ATTCGGGAAA CAGTTAAATC AATCTTAAAT CAACATGGTT ATGAAGCTAG TAGTCTGAGC
GATCCCCTCA AGGCGTTGGG AGAAGTATTT TATATTAAGC CAGACTTAAT TTTATGTGAT
ATTGCTATGC CCGAACTAAG TGGTTATGAG ATTTGCGCAA TGTTGCGTAA CTCTACAGCA
TTTCACCAAA CACCTATCAT TATGCTAACT GGTATAGAAG GATTTATTGA TCGGGTTAAG
GCCAGAATAG TTGGAGCTAC ACACTATTTG ACTAAACCTT TCGGAGAAAA TGAATTACTA
ATGTTAGTAG AAAAGTATAT TGGACCAGGA TTAGTAGAAG GTCCTGATAA TAACAGAATT
TACTCAAAAA ATAAATAG
 
Protein sequence
MQGNLNEIDI RSILQLIDLG QRTGELFVKA YSSPVSSNIA EPEKHFPKEA SWFVFFLSGQ 
IIYATPSAGS LFRLKDYLHR YKADRYLDTI KVPSVASVNA PEYGYLWALL EKGLLTPAQG
RSIINNMVYE TLFDLLSLRR GAFIFELGPA LTPQLTTLEV RSLLAKIMKQ IQEWNQFSPY
IQSVEQCPVI SVPAQLKKAL KPRIYNILSH WSDGQTSIQQ IARYLNRDVL TVAKAIYPFV
QKGIVQLLDQ SSETSMIKKS KPLERETKIC KVVCIDDDLV IRETVKSILN QHGYEASSLS
DPLKALGEVF YIKPDLILCD IAMPELSGYE ICAMLRNSTA FHQTPIIMLT GIEGFIDRVK
ARIVGATHYL TKPFGENELL MLVEKYIGPG LVEGPDNNRI YSKNK