| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3244 |
|---|
| Symbol | |
|---|
| ID | 4243665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4968019 |
|---|
| End bp | 4971612 |
|---|
| Gene Length | 3594 bp |
|---|
| Protein Length | 1197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638108241 |
|---|
| Product | putative CheA signal transduction histidine kinases |
|---|
| Protein accession | YP_722832 |
|---|
| Protein GI | 113476771 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.11034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.765258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAATC AAAAAAATAA TCAACTCGAC CATGGTCATA TTGAACAGAA AATAGGCAGC
AAAAGTAACA CGATAATGAA TCATGGAGAG TCGATAGATG AATGGTTTAA TAGTTTAGAA
ACTTCAGATG TAGATAATGC TAATTACAAT TTAATAGGAG AAAAAGTCAG GAGTGGCCCA
CAAGTAGGAC TCTCAGAACT AAATAGTTTA GCGGATTTGT TTGAAGGTGA AACACCAGAG
CTAGAGTCTA GTTGGGAAGA AGAAGAAATA CTAGATAAAG GCCAATTAGA AATGGATAAT
CTAAAAATAT CTGTAATTGA TATTGATGAT TCTGGTGATT TATCTGATTT ATTGCTTGAT
GTTAATGAAA CAAAAAAAAC ACTAGAAAAT GAAAATAAAA GTGAATTAGA TTTTGTGAAT
ATAGTGGATG ATGAATTATC AAATTTGCTG GATAATACAG AAGAAAATGA TCTATATAAA
GACAGTGATT CTCAAATAAA AAATACTAAT TTTCCAAAAG AAAAAAGTAG TAATAAAAAA
TCAAGAGATG ATTTGTCTCA GTTCTTTGAT GACTTAAATA ATGGAGATTT AGTAGAATTA
GAAAATGTAA ATGAATCAGA AATTGAGGGA GATTTAGAAA TACATTTACA AGAAAATAGT
GACCAATCTA AAAGCGAATT ATCCCCACAG AATAAACCAG AAAATTTTAA TTCAGATGAA
GTATCTTTTA GTGAATTATT TGTAATTGAC AATTTAGAAG AAGAGGTAGA AAATGATGAA
ATCTCAAAAA TAGATCAACT AAATACAAAT ATAAAAAATG ATTTATCCTC CAAAGCAGCA
AATTTAGAAG CATTGTTTGA AGATTTAGAA ACAGTTTATG GAGAAACAGA TTTAGAAGAA
ATTCCAGTAG AATCAGAAAA CTTGACATCT AGTTTTGTTG AACTATTCAA TCAAGAAGAT
TTAGACTTCT CTGACTCACA AGATTTAATT AATTTAGATG GGTTATACTC TCAGGATTTC
ATACAAGATG ATGATAATGA TTTGAATAGT TTATTAGATG ATAACGCTCT AGATTTTTAT
AACCTCGACT CTAATGAGTT ACTAGAAAAT ACATTTGAGA GTAATGATAC AACTCAAAAA
AATCAGCAAC TTTCGGCAGA TTTAGAAGAC TTATTGACTA AAATAAAAGA GCCAAAAGAT
AGTAACAAAG CTAATAAAGC TGTAGATTTA AATAAGTTGC TAGATGTTAA AAGTGAAAAA
ACTTCTGAAG AAATAGAAAA AAATCAAAAA TTAATAGCTA ATAACCAGAA AAAAGTAGAT
GATGAATTTA CTGAATTAGA AGCAATATTG AATGGAGAGA ACTCAGAAAA TTACAATGTT
TTTTTACAAT TAGAACAATT ATTAAATTGT ATAGATATAA ACTCCAAACC TCAAGTAAAC
AAAGTAGTTG TACACCAAAC TACTACAGAG GAAGTATTAG CCAGCATAGA AAATCAATCC
CAATCAGTAG AAGATCCATT TAGTGACTTA GAGAAATTGT TAGAAAATTC TGATCTAGAT
ACTTCTAATA AATCTAGTAT AGTTTCTACT CCTAATCCTC TTCGCAGAGG TAAACGTTCT
CCAGAACAAA CAGTTAAAAT ACCTGCAAAA CAACTAGATA ATCTCAGTAA CTTGGTAGGA
GAACTGGTAG TTAATCGTAA TAGTTTAGAA CAAGGCCAGG AACGAATGCG TCAGGTCTTA
GATAACCTAC TCAATCAGGT ATTACTATTA AGTGATGCTG GGCAAAGAAT GCACGACTTA
TATGAAAAAA CACTTCTAGA AAGGGCAATT TGGGATAGTC GTCACCACAA TCATTTTACT
AATACTCCTG ATAGAGCAGA TACAACGGAT GAAAGTAATG CAGGAAAAAG AAATTTTGAT
GACTCTCTTG AGCTAGATCG GGTAGAAAAC TTTACTCCTT TCCATTTATT AGCTCAGGAA
ACTATTGAAT ATATTGTCCG AGTACGAGAG TCTGCTTCTG ATGTTGAATT TTTGGTTGAT
GATGCAGAAC AAGTAACTCG TCAACTACGA CAGATAACAA CTCAACTGCA AGAAGGTTTC
ACTAGATCGA GGATGGTCCC TTTTTCGGAA ACGGTACAAC TATTGCCCCG TGCTGTGCGA
GACATTTCAA TGGAGTGTGG TAAACAGGTA CAACTTATAG TAGAAGGGAA AGAAACCTTA
ATTGATAAAA TGATTCAGGA TAAGCTTTCT GACCCGATGA AACACCTAAT GAATAATGCT
ATCACTCATG GAATTGAAAC ACCTCAAGAG CGTCTCAGTC TAAGTAAGTC TAGTCAAGGT
CGGATTACAA TTCGTGCTTT TCACCAAGGT AATCAAACGG TGATTTCGGT AGCAGATGAT
GGGGCAGGAA TAGATCCTGA AAAAGTGAAA CATCAAGCAA TCAAAAAAGG TGTAATTACT
AAGAAACAAG CTCAAGAAAT ATCTGAGCTG GATGTTTATG AATTATTGTT TCATCCTGGT
TTTACTACCA AAGCTCAAGC CGATAATTTT GCTGGTCGTG GAGTAGGCTT AGATGTTGTT
AAGACTAATT TGACTGATAT TCGAGGTACT ATTACTATTG ATTCAATTAT TGATAAAGGG
ACAATATTTA CAATTCGTTT ACCGCTGAAT TTAAGTATAT CGAAAGCATT GTGTTGTATT
AGCGATCGCT CCTGGATTGC TTTTCCTATG GATGGGGTAG AAGATATGGT GAAAGTTTCT
AAGGATGAGC TGACAATAGA CTCACAGGGA AAGAGCTGTA TAGAATGGCG AGGTACAAAG
TTGCCTTTCT GTCACTTGCG AGAGTTACTG GTTTATAATC GTCATCTCCG TCGCAGTAAT
GTTTATGGCA TCAATGCTGA GGATGATATG ACTTCAATTG TAGTGTTGCG TTCTGCTTAT
CCTGGGGTAT TTGTGGCGGT GCAAGTTGAT CAGGTTTTAG AACAACAGAA AGAAATTGTT
ATTAAACAGT TACAAGGTCC GGTACCTAAG CCTCTAGGTA TTGCAGGTGT AACTATTTTA
GGAGATGGTA AAGTTGTCGC GATCGCAGAT GTCATTGAGT TAATTAACCT GGCAACAGGA
AAACAACGCC GAGATGAAGG TAAAGTTTGG TCTCCTAGTA GTGGATATAG TAGTTCTTTT
CCTGTAGATC ACAAGAGTGA ATCAACAGTA TTAATTGTGG ATGACTCAAT TACAGTACGT
GAGTTGTTAT CAATGACATT TAGTAAAGCT GGTTATCGAG TTGAACAAGC AAGAGATGGT
AAGGATGCTT GGGAAAAACT GCGTGCTGGT TTACCTTGTG ATTTAGTGTT CTGTGATATT
GAAATGCCTC GGATGGATGG TTTTGAGTTA TTATCTCGGA TGCAGAAAGA TTCTAATTTG
CAGCTCTTGC CTGTGGCCAT GTTAACTTCT CGCGGCGCTA AAAAACACAT GGAAATGGCC
TTTGAGTTAG GAGCTAAAGG TTATTTCCAT AAACCATATG TAGAAGAAAA GTTGTTAGAT
GGGGCAGTTA GTATACTTGA GGGTGAAACC GTTGGGTATG TCGTGAATGC TTAA
|
|---|
| Protein sequence | MLNQKNNQLD HGHIEQKIGS KSNTIMNHGE SIDEWFNSLE TSDVDNANYN LIGEKVRSGP
QVGLSELNSL ADLFEGETPE LESSWEEEEI LDKGQLEMDN LKISVIDIDD SGDLSDLLLD
VNETKKTLEN ENKSELDFVN IVDDELSNLL DNTEENDLYK DSDSQIKNTN FPKEKSSNKK
SRDDLSQFFD DLNNGDLVEL ENVNESEIEG DLEIHLQENS DQSKSELSPQ NKPENFNSDE
VSFSELFVID NLEEEVENDE ISKIDQLNTN IKNDLSSKAA NLEALFEDLE TVYGETDLEE
IPVESENLTS SFVELFNQED LDFSDSQDLI NLDGLYSQDF IQDDDNDLNS LLDDNALDFY
NLDSNELLEN TFESNDTTQK NQQLSADLED LLTKIKEPKD SNKANKAVDL NKLLDVKSEK
TSEEIEKNQK LIANNQKKVD DEFTELEAIL NGENSENYNV FLQLEQLLNC IDINSKPQVN
KVVVHQTTTE EVLASIENQS QSVEDPFSDL EKLLENSDLD TSNKSSIVST PNPLRRGKRS
PEQTVKIPAK QLDNLSNLVG ELVVNRNSLE QGQERMRQVL DNLLNQVLLL SDAGQRMHDL
YEKTLLERAI WDSRHHNHFT NTPDRADTTD ESNAGKRNFD DSLELDRVEN FTPFHLLAQE
TIEYIVRVRE SASDVEFLVD DAEQVTRQLR QITTQLQEGF TRSRMVPFSE TVQLLPRAVR
DISMECGKQV QLIVEGKETL IDKMIQDKLS DPMKHLMNNA ITHGIETPQE RLSLSKSSQG
RITIRAFHQG NQTVISVADD GAGIDPEKVK HQAIKKGVIT KKQAQEISEL DVYELLFHPG
FTTKAQADNF AGRGVGLDVV KTNLTDIRGT ITIDSIIDKG TIFTIRLPLN LSISKALCCI
SDRSWIAFPM DGVEDMVKVS KDELTIDSQG KSCIEWRGTK LPFCHLRELL VYNRHLRRSN
VYGINAEDDM TSIVVLRSAY PGVFVAVQVD QVLEQQKEIV IKQLQGPVPK PLGIAGVTIL
GDGKVVAIAD VIELINLATG KQRRDEGKVW SPSSGYSSSF PVDHKSESTV LIVDDSITVR
ELLSMTFSKA GYRVEQARDG KDAWEKLRAG LPCDLVFCDI EMPRMDGFEL LSRMQKDSNL
QLLPVAMLTS RGAKKHMEMA FELGAKGYFH KPYVEEKLLD GAVSILEGET VGYVVNA
|
|---|
| |