Gene Tery_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3228 
Symbol 
ID4243823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4941201 
End bp4942649 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content41% 
IMG OID638108227 
Productputative lipid-A-disaccharide synthase 
Protein accessionYP_722818 
Protein GI113476757 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0763] Lipid A disaccharide synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.903486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCA TCATGGAAAA AGTTGATATT GTCATCCTCT CAAATGGTCC GGGAGAATTA 
GTTACCTGGG TAAGACCTGT TGTACAAGAG TTGCGACAAC AGGCGAATAT TGATATGAGA
ATTTCTCTTG TTCTCTCCCC TTGTCCTCAT GCTACGGGAA AAGAAGTAGC GATCGCTCGT
TCTTATCCAG AAGTAGACCG GGTACAACCA CCTGAATTTT TTTGGCGGTT TTTGCTCTGG
GGTAAGACGG CAGAAAATTG GCATTGGTAT CCTCAAGGAG TAGTTTTATT TCTGGGAGGT
GACCAGTTTT TTACTGTTGT GGTGGGAAAA CGTTTGGGTT ATCGCACTGT TATCTATGCT
GAGTGGGATG CTAGATGGTG GCGTTGGGTA GATAAATTTG GCGGGATGAA ACCAGAAGTT
TTTGCTCAGG TTCCTCCCAA ATATGCTGAT AAATTTACTG TTGTGGGAGA TTTGATGAAT
GAGGTCAGAA GTAGCAATAA ACTCAGAGCT CAGGACTCAG AATTCAGGAC TCAGAATTCA
GAATTAGTAA TAAATTCAGA ACTCAGAACC CAGAACTCAG AATTCAGAAT TAGTAATGAA
CTTGCATCTG AAAACTTAGA AGTGAGAAGT AATTTTTCTA ACCCTTCAAA AGGGGAGAGT
AGTGTGGAGT TAATTGGGTT ATTGCCTGGG TCGAAACCTA CTAAGTTGTC TTTAGGTGTA
CCTTTAACTT TAGCGATCGC TCAACATCTC CATAAAATTC GTCCGCAAAC TAAATTTATA
ATTCCGGTAG CTCCCACCCT TGACTTAAAT ACTTTAGCTA ATTTTGCTGA CCCGGAAAAA
AATCCAGCAA TTGAAAAAAT GGGGGGTGTG GGAGCAAAAT TATTAACGCC TTCTTTGAAT
AGGAAGAAAA CAGATAGTAG AAAACAGGGA GCATATTTTG AAATTCAAAA TTCTCATCTG
GTGACAACTG GAGGTTTAAA AATAGAATTA ATCACCCGGA ACCCTGCTTA TGACCTACTT
TCTAAATGTC GTCTTTGTCT GACTACTGTC GGTGCGAATA CTGCTGAGTT AGGTTCCCTG
GCAATACCGA TGATAGTTTT GTTACCCACT CAAGAATTAG ATGTTATGAG AGCGTGGGAT
GGTTTACCTG GGTTACTTGC AAATTTGCCA GTGGTTGGCG CTGCTTTTGC TACCGGAATT
AATTGGTTAG TGCTCCGTAA GGGACAACTG TTTGCTTGGC CAAATATTTG GGCAAAACAG
GAAATTGTGC CTGAGTTAGT AGGGAAATTA AAACCCGAAG TTGTGGCAGA GTTGGTTTTA
GAGTTTCTGA CTCATCCAGA GAAGTTGGCA GAAATGCGCG ATCGCCTCTG TAATGTGAGG
GGTAAACCAG GGGCAGCACA AAAGTTAGCA GAAATTGTAT TATCGTTGAG CTATGGTAGT
CAAATATAA
 
Protein sequence
MPSIMEKVDI VILSNGPGEL VTWVRPVVQE LRQQANIDMR ISLVLSPCPH ATGKEVAIAR 
SYPEVDRVQP PEFFWRFLLW GKTAENWHWY PQGVVLFLGG DQFFTVVVGK RLGYRTVIYA
EWDARWWRWV DKFGGMKPEV FAQVPPKYAD KFTVVGDLMN EVRSSNKLRA QDSEFRTQNS
ELVINSELRT QNSEFRISNE LASENLEVRS NFSNPSKGES SVELIGLLPG SKPTKLSLGV
PLTLAIAQHL HKIRPQTKFI IPVAPTLDLN TLANFADPEK NPAIEKMGGV GAKLLTPSLN
RKKTDSRKQG AYFEIQNSHL VTTGGLKIEL ITRNPAYDLL SKCRLCLTTV GANTAELGSL
AIPMIVLLPT QELDVMRAWD GLPGLLANLP VVGAAFATGI NWLVLRKGQL FAWPNIWAKQ
EIVPELVGKL KPEVVAELVL EFLTHPEKLA EMRDRLCNVR GKPGAAQKLA EIVLSLSYGS
QI