Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3228 |
Symbol | |
ID | 4243823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4941201 |
End bp | 4942649 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638108227 |
Product | putative lipid-A-disaccharide synthase |
Protein accession | YP_722818 |
Protein GI | 113476757 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0763] Lipid A disaccharide synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.903486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCA TCATGGAAAA AGTTGATATT GTCATCCTCT CAAATGGTCC GGGAGAATTA GTTACCTGGG TAAGACCTGT TGTACAAGAG TTGCGACAAC AGGCGAATAT TGATATGAGA ATTTCTCTTG TTCTCTCCCC TTGTCCTCAT GCTACGGGAA AAGAAGTAGC GATCGCTCGT TCTTATCCAG AAGTAGACCG GGTACAACCA CCTGAATTTT TTTGGCGGTT TTTGCTCTGG GGTAAGACGG CAGAAAATTG GCATTGGTAT CCTCAAGGAG TAGTTTTATT TCTGGGAGGT GACCAGTTTT TTACTGTTGT GGTGGGAAAA CGTTTGGGTT ATCGCACTGT TATCTATGCT GAGTGGGATG CTAGATGGTG GCGTTGGGTA GATAAATTTG GCGGGATGAA ACCAGAAGTT TTTGCTCAGG TTCCTCCCAA ATATGCTGAT AAATTTACTG TTGTGGGAGA TTTGATGAAT GAGGTCAGAA GTAGCAATAA ACTCAGAGCT CAGGACTCAG AATTCAGGAC TCAGAATTCA GAATTAGTAA TAAATTCAGA ACTCAGAACC CAGAACTCAG AATTCAGAAT TAGTAATGAA CTTGCATCTG AAAACTTAGA AGTGAGAAGT AATTTTTCTA ACCCTTCAAA AGGGGAGAGT AGTGTGGAGT TAATTGGGTT ATTGCCTGGG TCGAAACCTA CTAAGTTGTC TTTAGGTGTA CCTTTAACTT TAGCGATCGC TCAACATCTC CATAAAATTC GTCCGCAAAC TAAATTTATA ATTCCGGTAG CTCCCACCCT TGACTTAAAT ACTTTAGCTA ATTTTGCTGA CCCGGAAAAA AATCCAGCAA TTGAAAAAAT GGGGGGTGTG GGAGCAAAAT TATTAACGCC TTCTTTGAAT AGGAAGAAAA CAGATAGTAG AAAACAGGGA GCATATTTTG AAATTCAAAA TTCTCATCTG GTGACAACTG GAGGTTTAAA AATAGAATTA ATCACCCGGA ACCCTGCTTA TGACCTACTT TCTAAATGTC GTCTTTGTCT GACTACTGTC GGTGCGAATA CTGCTGAGTT AGGTTCCCTG GCAATACCGA TGATAGTTTT GTTACCCACT CAAGAATTAG ATGTTATGAG AGCGTGGGAT GGTTTACCTG GGTTACTTGC AAATTTGCCA GTGGTTGGCG CTGCTTTTGC TACCGGAATT AATTGGTTAG TGCTCCGTAA GGGACAACTG TTTGCTTGGC CAAATATTTG GGCAAAACAG GAAATTGTGC CTGAGTTAGT AGGGAAATTA AAACCCGAAG TTGTGGCAGA GTTGGTTTTA GAGTTTCTGA CTCATCCAGA GAAGTTGGCA GAAATGCGCG ATCGCCTCTG TAATGTGAGG GGTAAACCAG GGGCAGCACA AAAGTTAGCA GAAATTGTAT TATCGTTGAG CTATGGTAGT CAAATATAA
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Protein sequence | MPSIMEKVDI VILSNGPGEL VTWVRPVVQE LRQQANIDMR ISLVLSPCPH ATGKEVAIAR SYPEVDRVQP PEFFWRFLLW GKTAENWHWY PQGVVLFLGG DQFFTVVVGK RLGYRTVIYA EWDARWWRWV DKFGGMKPEV FAQVPPKYAD KFTVVGDLMN EVRSSNKLRA QDSEFRTQNS ELVINSELRT QNSEFRISNE LASENLEVRS NFSNPSKGES SVELIGLLPG SKPTKLSLGV PLTLAIAQHL HKIRPQTKFI IPVAPTLDLN TLANFADPEK NPAIEKMGGV GAKLLTPSLN RKKTDSRKQG AYFEIQNSHL VTTGGLKIEL ITRNPAYDLL SKCRLCLTTV GANTAELGSL AIPMIVLLPT QELDVMRAWD GLPGLLANLP VVGAAFATGI NWLVLRKGQL FAWPNIWAKQ EIVPELVGKL KPEVVAELVL EFLTHPEKLA EMRDRLCNVR GKPGAAQKLA EIVLSLSYGS QI
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