| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3224 |
|---|
| Symbol | |
|---|
| ID | 4243819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4932298 |
|---|
| End bp | 4936287 |
|---|
| Gene Length | 3990 bp |
|---|
| Protein Length | 1329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638108224 |
|---|
| Product | magnesium chelatase subunit H |
|---|
| Protein accession | YP_722815 |
|---|
| Protein GI | 113476754 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR02025] magnesium chelatase, H subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.335688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACAT CCGTAAAGCC TACTGTTCGC CACATTGTCC CAGCAGACTT AAAAGGGCGA
TCGCTCTTAA AAGTCGTATA TATAGTTTTA GAAGCTCAAT ATCAAAGCTC CCTCTCAGCA
GCAGTGCGTT CTATAAATGA AAAAAATCCT AATCTGGCCA TAGAAATAAG TGGCTATCTA
ATTGAAGAAC TCCGGGACCC AAAAAACTAT GAAAACTTTA GGCGAGAAGT TTCCGAAGCT
AACATCTTTA TAGCTTCCCT AATTTTCATT GAAGACCTAG CAGAAAAAGT CGTAGAAGCC
GTCACACCCC ATCGCGACAA ACTTGACGCT GCTGTGGTTT TCCCTTCCAT GCCACAAGTG
ATGCGCCTGA ATAAAATGGG AACATTCTCA ATGGCCCAAC TAGGCCAGAG CAAAAGCGCC
ATTGCTCAAT TTATGCGGAA GCGGAAAGAA AAATCTGGTT CTTCTTTTCA AGACGGAATG
TTGAAATTAC TACAAACTCT GCCAAAAGTT TTGAAGTATA TGCCTCTTGA CAAAGCCCAA
GATGCTAGAA ACTTTATGCT GAGTTTCCAG TATTGGTTAG GAGGTTCCTC GGAAAACCTG
GAAAATTTCC TGCTCATGTT GGCAGACAAA TACGTTTTCA AAGACCAGAA AAAAAGTTCT
CTACAATATG TCGATCCTGT TGTTTATCCA GACATGGGTA TCTGGCATCC CCTGGCGCCC
AAAATGTTTG AGGATGTCAA AGAATATCTC AACTGGTACA ACAACCGTAA AGACATTTCC
GAAAATTTGA AAGATCCCCT GGCCCCCTGT GTTGGTCTTG TCTTGCAGCG AACCCACCTA
GTGACAGGAG ATGATGCTCA TTATGTTGCC ATGTTGCAAG AGTTGGAAGC AATGGGAGCG
CGAGTTCTGC CTGTATTTGC CGGAGGATTA GATTTTTCTA AACCGGTCGA TGCCTACTTT
TGGGAAGTGG TAACTAAAGG AGTTGAACCT ACACCATTAG TAGATACGGT TATTTCTTTA
ACTGGTTTTG CATTGGTAGG TGGACCTGCT AGACAAGACC ATCCAAAAGC GGTAGAATCT
TTAAAAAGGT TGAACCGACC CTACATGGTA GCATTACCTC TGGTTTTCCA AACTACTGAA
GAATGGCAAG AAAGTGACCT TGGTCTCCAC CCCATACAAG TTGCTTTGCA AATAGCTATT
CCTGAACTTG ATGGGGCGAT CGAACCTATC ATTATGTCTG GGCGAGACGG AGCAACGGGA
AAAGCGATCG CTCTCCAAGA CCGTATCGAA GCTGTAGCTC AACGCGCTCT TAAATGGGCA
AGTCTTAGAC GTAAACCCAA ACTGAATAAA AAAATTGCTA TTACTATTTT CAGTTTCCCT
CCAGATAAAG GGAATGTGGG TAGTGCTGCA TATTTAGATG TATTTGGCTC TATCTATGAA
GTTGTGAAAG CACTCAAAGG CAATGGTTAC GATATTCAAG ACTTGCCAGA CTCTGCAGAA
GAATTAATGA AGCAAGTCAT CCAAGATGCT ACTGCCCAAT ATCAAAGTCC GGAGCTCAAT
ATTGCTTACC GAATGTCAGT TCTAGAATAT GAACGTCTGA CACCATACTC GGAAAGGTTG
CATGAAAATT GGGGACTACC TCCAGGAAAC CTGAATAGCG ATGGCGAAAA TTTACTTATT
TACGGTAAGA GTTTCGGAAA TGTTTTCATC GGCGTCCAAC CAACATTTGG TTATGAAGGG
GACCCCATGC GGTTGTTATT CTCCCATTCT GCAAGTCCCC ATCATGGTTT TGCTGCTTAC
TATACCTATT TAGAACAAAT TTGGAAAGCA GATGCAGTCC TACATTTCGG TACTCACGGT
TCTTTAGAAT TTATGCCTGG CAAGCAAATT GGTATGTCTG GACATTGTTA CCCGGATAAT
CTCATAGGCA ATATTCCCAA CATCTATTAT TATGCTGCAA ATAATCCTAG TGAGGCAACT
ATTGCTAAAC GCCGGAGTTA TGCTGAGACT ATTTCTTACT TAACTCCCCC TGCAGAAAAT
GCTGGTTTAT ATAAAGGTTT GCAGGAGTTG AATGAGTTAA TAGCTTCCTA TCAAACTTTG
AAGGATAGCG GGCGAGGTGT TCCTATTGTT AACACTATTA TGGATAAATG CCGGATAGTG
AATTTAGACC AGGATGTAAC TCTGCCGGAA AAAGATGCTC AGGAGTTGAC CGCTGAGGAA
CGGGATCAAG TTGTTGGGGA TGTTTATCGC AGGTTGATGG AAATTGAGTC CCGGTTGTTG
CCTTGTGGTT TGCACGTTAT TGGTAAACCT CCTACTGCTG AGGAAGCGAT CGCTACTTTG
GTAAATATTG CTAGTTTAGA CCGGGAAGAG GAAGGGATAA CTGGTTTACC TCGAATAATT
GCTAATAGCC TCAACCGGGA TATTGAGGAA CTTTACCAAA ATAATAATAA AGGTATTTTG
GCAGATGTGG AGTTACTTCA GAATATTACG GAAGGGACTC GTGCTGCTGT AGCGGCATTA
GTGCACCAAC AAACTGATGC TGAGGGTCGA GTTTCGATGG TGGGTAAACT CAATTTCTTT
AATATGAGGA AAAAAGCACC TTGGATAGAA GCTCTGGAAG CAGCAGGTTT TCCTGATGTT
GATGAAGAAG CTATCAAGCC TCTGTTTGAA TATTTAGAGT TTTGCCTAGA ACAGGTTTGT
GCTGATAATG AGTTGGGTTC TCTGTTACGA GCGTTTGAAG GGGAATATAT TTTACCAGGA
CCCGGTGGCG ACCCCATTCG GAACCCTGAT GTTTTGCCTA CTGGTAAGAA TATGCACGCT
CTCGACCCCC AGTCTATTCC TACTGCTGCT GCGGTTAAGT CGGCAAAAAC TGTAGTTGAT
CGTTTATTGG CACGACAGAT GCAGGAGAAT GGTGGGCAGT ATCCAGAAAC TATCGCTGTT
GTTTTGTGGG GAACTGATAA TATCAAGACT TATGGTGAAT CTCTTGCTCA GGTGATGTGG
ATGGTAGGGG TTAAACCTGT ACCTGATGCT TTGGGTAGGG TGAATAAGCT GGAGTTAATT
CCCCTTGAAG AGTTGGGTCG GCCCCGGGTT GACGTGGTGA TTAATTGTTC TGGTGTATTC
CGAGATTTAT TTATTAATCA AATGAATCTT TTGGATAAGG CTGTGAAAAT GGCAGCAGAA
GCACATGAAC CGGAAGAGAT GAATTTTGTT CGCAAGCATG CTCTCAAGCA AGCTGAAGAT
TTGGGAGTGA ATTTACGTCA AGCTGCAACA CGGGTATTTT CTAATGCTTC CGGTTCTTAT
GCTGCAAATG TAAATTTGGC GGTGGAGAAT AGTACTTGGG AAGATGAGTC GGAATTACAG
GAAATGTATT TGAAGCGCAA GTCTTTTGCT TTTAATTCTG ATAACCCAGG AATGATGGAG
GATAACCGGA AAGTTTTTGA GTCGGCATTG AAAACTGCTG ATGCGACTTT TCAGAATTTA
GATTCGTCTG AGATAAGTTT GACCGATGTG AGTCATTATT TTGATTCGGA TCCGACAAAA
GTTGTGGCAA CTCTCAGGGG TGATGGTAAA CAACCAGCTT CTTATATTGC GGATACGACG
ACTGCGAATG CTCAGGTACG GTCTTTGTCT GAGACGGTGC GTTTGGATGC GCGAACAAAA
ATGTTGAATC CAAAATGGTA TGAGGGGATG TTGTCTCATG GTTATGAAGG TGTGCGGGAG
TTGTCTAAGC GTCTGGTGAA TACTATGGGA TGGAGTGCGA CTGCAGGCGC GGTTGATAAT
TGGGTTTATG AGGATGTCAA TGAGACGTTT ATTCAGGATA AGCAGATGCA GCAGCGGTTG
TTGAATTTGA ATCCCCATTC GTTCCGGAAG ATCGTAGCTA CATTGTTGGA GGTGAATGGT
CGCGGTTATT GGGAGACAGG TGAGAGTAAT TTGGATCGGT TGCGGGAGTT GTATCAGCAA
GTGGAGGATC GGATAGAAGG AATAGAATAA
|
|---|
| Protein sequence | MFTSVKPTVR HIVPADLKGR SLLKVVYIVL EAQYQSSLSA AVRSINEKNP NLAIEISGYL
IEELRDPKNY ENFRREVSEA NIFIASLIFI EDLAEKVVEA VTPHRDKLDA AVVFPSMPQV
MRLNKMGTFS MAQLGQSKSA IAQFMRKRKE KSGSSFQDGM LKLLQTLPKV LKYMPLDKAQ
DARNFMLSFQ YWLGGSSENL ENFLLMLADK YVFKDQKKSS LQYVDPVVYP DMGIWHPLAP
KMFEDVKEYL NWYNNRKDIS ENLKDPLAPC VGLVLQRTHL VTGDDAHYVA MLQELEAMGA
RVLPVFAGGL DFSKPVDAYF WEVVTKGVEP TPLVDTVISL TGFALVGGPA RQDHPKAVES
LKRLNRPYMV ALPLVFQTTE EWQESDLGLH PIQVALQIAI PELDGAIEPI IMSGRDGATG
KAIALQDRIE AVAQRALKWA SLRRKPKLNK KIAITIFSFP PDKGNVGSAA YLDVFGSIYE
VVKALKGNGY DIQDLPDSAE ELMKQVIQDA TAQYQSPELN IAYRMSVLEY ERLTPYSERL
HENWGLPPGN LNSDGENLLI YGKSFGNVFI GVQPTFGYEG DPMRLLFSHS ASPHHGFAAY
YTYLEQIWKA DAVLHFGTHG SLEFMPGKQI GMSGHCYPDN LIGNIPNIYY YAANNPSEAT
IAKRRSYAET ISYLTPPAEN AGLYKGLQEL NELIASYQTL KDSGRGVPIV NTIMDKCRIV
NLDQDVTLPE KDAQELTAEE RDQVVGDVYR RLMEIESRLL PCGLHVIGKP PTAEEAIATL
VNIASLDREE EGITGLPRII ANSLNRDIEE LYQNNNKGIL ADVELLQNIT EGTRAAVAAL
VHQQTDAEGR VSMVGKLNFF NMRKKAPWIE ALEAAGFPDV DEEAIKPLFE YLEFCLEQVC
ADNELGSLLR AFEGEYILPG PGGDPIRNPD VLPTGKNMHA LDPQSIPTAA AVKSAKTVVD
RLLARQMQEN GGQYPETIAV VLWGTDNIKT YGESLAQVMW MVGVKPVPDA LGRVNKLELI
PLEELGRPRV DVVINCSGVF RDLFINQMNL LDKAVKMAAE AHEPEEMNFV RKHALKQAED
LGVNLRQAAT RVFSNASGSY AANVNLAVEN STWEDESELQ EMYLKRKSFA FNSDNPGMME
DNRKVFESAL KTADATFQNL DSSEISLTDV SHYFDSDPTK VVATLRGDGK QPASYIADTT
TANAQVRSLS ETVRLDARTK MLNPKWYEGM LSHGYEGVRE LSKRLVNTMG WSATAGAVDN
WVYEDVNETF IQDKQMQQRL LNLNPHSFRK IVATLLEVNG RGYWETGESN LDRLRELYQQ
VEDRIEGIE
|
|---|
| |