Gene Tery_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3219 
Symbol 
ID4243814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4925465 
End bp4926214 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content40% 
IMG OID638108219 
ProductABC transporter related 
Protein accessionYP_722810 
Protein GI113476749 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.281144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.96204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGG ACAAAATTAC AATTAGTCAT TTAGGAGTCC ATTATCGTAC CCTTGAGGCG 
TTGCGAAACA TTACCCTAAA GATACAAGCA GGAAGGTTAA CAGGTATTAT TGGCCCTAAT
GGAGCAGGAA AAAGTACTTT ATTAAAAGGA ATGCTGGGAT TAATTCCGGT GAGTGGAGGT
TCTGTAATCT ACAATAACAA ATCACTTCAG AAACAGTTAG GCAGAGTTGC CTATGTTCCT
CAGCGATCGC AAATTGATTG GACTTATCCT GCGACTGTCT GGGATGTGGT AATGATGGGT
CGAGTCCATC AGACTGGTTG GTTTTGTCGC TTTTCTAGGA TGAGTCGCCA GATAGCATTG
GAGGCATTGA CAAGGGTGGG GATGGATAGT TATCGCGATC GCCCCATCGG TCAACTTTCT
GGTGGTCAGC AACAACGGGT TTTTTTAGCG CGGTCTTTAG CTCAGAAAGC AGATATTTTC
TGTTTTGATG AGCCATTTGT TGGGGTTGAT CAGAAGACTG AAAATATTAT TTTTGAGATT
TTTCACGAGT TAGCTAAAGC TGGAAAAGTT GTGATAGTTG TTAATCATGA TTTGGGAAAA
TCTATTACTA ATTTTGATGA TTTGATTCTG TTAAATAAAG AGTTAATTGC TGTTGGCAAT
CGACAAATTG TATTACAAGA AGAAAATTTG TATCGTGCTT ATGGGGGTAA AGTAGGTTTC
TTTTCGGAGT CCTTAAAGCA AGTTGCTTGA
 
Protein sequence
MNEDKITISH LGVHYRTLEA LRNITLKIQA GRLTGIIGPN GAGKSTLLKG MLGLIPVSGG 
SVIYNNKSLQ KQLGRVAYVP QRSQIDWTYP ATVWDVVMMG RVHQTGWFCR FSRMSRQIAL
EALTRVGMDS YRDRPIGQLS GGQQQRVFLA RSLAQKADIF CFDEPFVGVD QKTENIIFEI
FHELAKAGKV VIVVNHDLGK SITNFDDLIL LNKELIAVGN RQIVLQEENL YRAYGGKVGF
FSESLKQVA