Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3195 |
Symbol | |
ID | 4243790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4884647 |
End bp | 4887262 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638108201 |
Product | hypothetical protein |
Protein accession | YP_722792 |
Protein GI | 113476731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0705059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTATC CTCTGCCACC TCCAGAACTA CCTCCAATTG TTGAAACTTT GCCTTCACAA TCTGTAAGCC AATATGTTAC AGATATAGGA CAGGAAGTAT CTACTCTAAA TCAAAATCAA TTGAGTCCGA TGTCAAAATT TAGCCAGGTT GGAGAGGAAA TCAAAGTATC TGTAAAGAAC ACTTTCTTAG GAGAAGAGTT CAGAGAAACT GTATTATACA AATTTCCTCA AATTACCTCA AATTTTGACC ACACTCAGAA AATCAGTCCA ATTCATACAA CCTCAGCTAA TCTTGGACCA CCAATAGAGA TAGAGATATC ATCAGCACCG AGAATTTCTA CTCTGGAAAG CCAAATCAAT TCAGGTAGAA AAAGAATATT CTCATCCATC TCGTTCTCAG ATTTCTCAGA ATATGCGCTC TCTGAAAAAG AGCCAGAAAA TAATCAACTA ACAAATTCAT TTAGTCTCAA TAGTAGAAAA ATATTAGAAC GTTTCAATCA CACAAAACAA CTAATTCCAT CTAAATTTGA GATAGGGCAA ACTATCAGAG AAAACAACAC GCCAAAACTA CCAAACCTTC CCCAAGACGA ACAACCCATT AGGGAAACTG AAACCCCAGA CTCAGAAGAG AATAAAAAAG AAACTCAATT TCCCACAACA AAACCAGAAT CTCAAACTCA AGACTCAGAG AATAAAACGG AAGATAGACA ACCTCTTGAA ATACCTCTAC CAGCAGATGT AGTAGAGGTA ACTGCAGACC GCCAAGAATA TAACGAGCAA CGGCGACTTA TTTCTGCAGT TGGTAAGGTA ACAGTACGAT TTAGTCAAGG AGTAATTAGT GCTGACAAAG TACAAGTTAA CCTGACAACT CGTCAACTGC TAGCTATAGG AAATGCTGTT TTTACTAAAG CAGAACAAGT CTTACTTGGG GAACGTATGG AATACAACTT TACCCTTGAC AAAGGGTTAA TTGAGAAAGC AAGTGGGATT ATTTTTGTTG GGGATGCGGA GCAAAGCACT TCCAAGTCTT TACCAACTAC AGAAGGAGTA GGAGCATTAG AGGCAATATC CTTGAGCGAT CGTATTGCTG CTACTCAACC TCCAACAAAA GTGAAAGCTA CTGAAGGTAC AAAACTTAGA TTTAAAGCTA AACTAAAAGC ACCAAAACAG TCAGGGATAG TTAACAGACT ACGCTTTGAA GCTGACCGTC TCAACTTATT AGGTGCTGGA ACTTGGGAAG CTATAAACCT TCGATTAACT AATGACCCAT TTTCACCTCC AGAGGTGGAA TTAAGGTCTG ATCGAGCTAT ACTTAAACCT CTATCTCCCT TTCAGGATGA GTTGATAACG AAAAAATCCC GATTAGTATT TGACCAACGT TTTAGTTTAC CACTGTTTCG TGAACGAACC GTTATAGATC GCCAGCAACG AGACCCTCTC CCAATTCAAA TTGGTTATGA CCAAGATGAT CGAGGTGGTT TATTTATTGA AAGTACATTT GAACCTCTTC TCCCAGGTCC TTTGCAAATC AAAATAAGTC CTCAATACTA CTTGGAAAGA GCATTTTTGG GAGATGAAAA TGACTACCCT ATAGATGGTA ATGTTTTTGG TCTCAAAGCT TCTGTAAATG GTACCATAAC ACCCACAACT CAGGTAGAGG GACGTGCCAC ATTTCTGACC TTTGAAGATT TTCCAGATTT GGAAGAAAAT GACTTTCGGG GTAGTGCTCG ACTTAGGCAG TTTTTCCAAG GTTACAATTT GACTGGTGAG TATAGTTATC GCGATCGCTT ATTTAATGGT AGTTTAGGAT TTCAAACTGT TCATAGTAGT GCAGGTGTTG TGTTAGCTTC CCCTGTAATA ACACTAGGTG AAACTGGTGT AGAATTTAGT TTTCAGAGTG GATATCAAGT TGTAAATGCG AGAACAGATC GTCGAGAGTT GTTAAAGGAT ATTCAACCAT TTGAACCTCT ACCTAATGAT AAAAATGATG ATGATAGTGA TTCTAGATCG CGGGCTGATC TTGGTCGTTT CCAGAGTGTA GTTTCTCTGA GATACCCACT AACTATCTGG AGTGGTAAAC CATTAACGGC TAATGCAACT GAGGGTTTGA GATATACCAG CAAACCAGTA GTTCCGTTTT TGCAAATGGT GTTAGGACTT ACAGGTGCTA CTAGCTTTTA TAGTAATGAT GAAGACCAAT CTTTTGTGCG TGGAAGTCTT GGGTTTACTG GACAATTTGG GCATTTTTCT AGAGACTTTT TTGATTATAC TGGATTTAAC TTAACTTATA GTCAGACTGG TCTGAGTGGT CAGTCACCTT TTTTCTTTGA CCGGGTGGAG GATACAAATG TGCTCTTATT TGGTTTAGTC CAACAAATTT ATCAAGGTTT TCGGGTTGGT TACCAGAGTG GTATCAACTT AGAAAATGGT GATATTCTTG ATGATAGAAT TACACTAGAA TATAGTCGTC GTACTTATGG GGTGGTATTA GTTTTTAGTC CTAGACGACA AACTGGTACA TTTAGTCTCC GGATCAGTGA CTTCAACTGG GAAGGTGGTA CAACTCCGTT TTCTGGGGAA GATGTTCGAC CGGTTGGTGG TGGTGTAGTT CGTTAA
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Protein sequence | MSYPLPPPEL PPIVETLPSQ SVSQYVTDIG QEVSTLNQNQ LSPMSKFSQV GEEIKVSVKN TFLGEEFRET VLYKFPQITS NFDHTQKISP IHTTSANLGP PIEIEISSAP RISTLESQIN SGRKRIFSSI SFSDFSEYAL SEKEPENNQL TNSFSLNSRK ILERFNHTKQ LIPSKFEIGQ TIRENNTPKL PNLPQDEQPI RETETPDSEE NKKETQFPTT KPESQTQDSE NKTEDRQPLE IPLPADVVEV TADRQEYNEQ RRLISAVGKV TVRFSQGVIS ADKVQVNLTT RQLLAIGNAV FTKAEQVLLG ERMEYNFTLD KGLIEKASGI IFVGDAEQST SKSLPTTEGV GALEAISLSD RIAATQPPTK VKATEGTKLR FKAKLKAPKQ SGIVNRLRFE ADRLNLLGAG TWEAINLRLT NDPFSPPEVE LRSDRAILKP LSPFQDELIT KKSRLVFDQR FSLPLFRERT VIDRQQRDPL PIQIGYDQDD RGGLFIESTF EPLLPGPLQI KISPQYYLER AFLGDENDYP IDGNVFGLKA SVNGTITPTT QVEGRATFLT FEDFPDLEEN DFRGSARLRQ FFQGYNLTGE YSYRDRLFNG SLGFQTVHSS AGVVLASPVI TLGETGVEFS FQSGYQVVNA RTDRRELLKD IQPFEPLPND KNDDDSDSRS RADLGRFQSV VSLRYPLTIW SGKPLTANAT EGLRYTSKPV VPFLQMVLGL TGATSFYSND EDQSFVRGSL GFTGQFGHFS RDFFDYTGFN LTYSQTGLSG QSPFFFDRVE DTNVLLFGLV QQIYQGFRVG YQSGINLENG DILDDRITLE YSRRTYGVVL VFSPRRQTGT FSLRISDFNW EGGTTPFSGE DVRPVGGGVV R
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