Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3184 |
Symbol | lipB |
ID | 4243856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4865769 |
End bp | 4866434 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638108191 |
Product | lipoyltransferase |
Protein accession | YP_722782 |
Protein GI | 113476721 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.052426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0826899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTC AAACTTGCCA GTTAATTTGT CCAGGATTAA CAAAGTATTC GGTGGCCTGG GAATGGCAGC GATCGCTTGT TCAACAACGT CATAATTGTC CAGAATTGGC TGATGTTCTA ATATTATTGG AACATCCACA GGTTTATACT TTAGGACAAG GGGCAAAATT AGATTTTCTT AAATTCGATC CTACTCAAAA TAAATACGAA CTCCACCGAG TAGAACGAGG AGGAGAAGTA ACATACCATT GCCCTGGCCA ACTGGTAGGT TATCCAATCC TCAACTTAAA ACATTATCAG CAAGACTTAC ATTGGTATCT ACGACAATTA GAAGAAGTAT TGATCAAAGT CTTAGATATC TTTGGTCTCA AGGGTGAACG ATATCCAGGT TTAACAGGGG TTTGGTTGGA GGGTCGAAAA GTAGGAGCAA TTGGGATTAA AGTTAGCCGT TGGATAACCA TGCACGGCTT TGCTCTCAAT GTCTCTCCTA ATTTAGAAGG TTTTCAAAGG ATTGTACCTT GTGGTATTTC TGATAAATCT GTAGGTAGTT TGGCTCAGTT TATTCCTAGT ATTACTACAG ATGAAGTACT TCCTCTAGTA GCTAATGCTT TTGCTAAAGT ATTTGGAGTC AAATTAGTCA AAAGTACAAA TGCTATATTA TTTTGA
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Protein sequence | MTSQTCQLIC PGLTKYSVAW EWQRSLVQQR HNCPELADVL ILLEHPQVYT LGQGAKLDFL KFDPTQNKYE LHRVERGGEV TYHCPGQLVG YPILNLKHYQ QDLHWYLRQL EEVLIKVLDI FGLKGERYPG LTGVWLEGRK VGAIGIKVSR WITMHGFALN VSPNLEGFQR IVPCGISDKS VGSLAQFIPS ITTDEVLPLV ANAFAKVFGV KLVKSTNAIL F
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