Gene Tery_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3184 
SymbollipB 
ID4243856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4865769 
End bp4866434 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content38% 
IMG OID638108191 
Productlipoyltransferase 
Protein accessionYP_722782 
Protein GI113476721 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.052426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0826899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTC AAACTTGCCA GTTAATTTGT CCAGGATTAA CAAAGTATTC GGTGGCCTGG 
GAATGGCAGC GATCGCTTGT TCAACAACGT CATAATTGTC CAGAATTGGC TGATGTTCTA
ATATTATTGG AACATCCACA GGTTTATACT TTAGGACAAG GGGCAAAATT AGATTTTCTT
AAATTCGATC CTACTCAAAA TAAATACGAA CTCCACCGAG TAGAACGAGG AGGAGAAGTA
ACATACCATT GCCCTGGCCA ACTGGTAGGT TATCCAATCC TCAACTTAAA ACATTATCAG
CAAGACTTAC ATTGGTATCT ACGACAATTA GAAGAAGTAT TGATCAAAGT CTTAGATATC
TTTGGTCTCA AGGGTGAACG ATATCCAGGT TTAACAGGGG TTTGGTTGGA GGGTCGAAAA
GTAGGAGCAA TTGGGATTAA AGTTAGCCGT TGGATAACCA TGCACGGCTT TGCTCTCAAT
GTCTCTCCTA ATTTAGAAGG TTTTCAAAGG ATTGTACCTT GTGGTATTTC TGATAAATCT
GTAGGTAGTT TGGCTCAGTT TATTCCTAGT ATTACTACAG ATGAAGTACT TCCTCTAGTA
GCTAATGCTT TTGCTAAAGT ATTTGGAGTC AAATTAGTCA AAAGTACAAA TGCTATATTA
TTTTGA
 
Protein sequence
MTSQTCQLIC PGLTKYSVAW EWQRSLVQQR HNCPELADVL ILLEHPQVYT LGQGAKLDFL 
KFDPTQNKYE LHRVERGGEV TYHCPGQLVG YPILNLKHYQ QDLHWYLRQL EEVLIKVLDI
FGLKGERYPG LTGVWLEGRK VGAIGIKVSR WITMHGFALN VSPNLEGFQR IVPCGISDKS
VGSLAQFIPS ITTDEVLPLV ANAFAKVFGV KLVKSTNAIL F