| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3183 |
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| Symbol | |
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| ID | 4243855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4864218 |
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| End bp | 4864865 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638108190 |
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| Product | sigma 54 modulation protein / SSU ribosomal protein S30P |
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| Protein accession | YP_722781 |
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| Protein GI | 113476720 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.237047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.086671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTTG TTATCCAGGG TAAAAATATA GAAATAACCG ATTCCATTCA CGAATATGTT
AATCAAAAAA TTGAAAAAGC AGTTAATCAT TTTCAACAAC TAACCACCGA AGTAGATGTA
CATCTGTCAG TCGCTCGAAA TCCGCGCATA AATCCTAAGC AGACAGCAGA AGTAACTATC
TACGCTAACG GTACAGTCAT TCGTGCCCAG GAAAGTAGCG AAAATTTGTA TGCTAGCATT
GACTTGGTAG CAGATAAAAT TGCACGCCAA CTCAGAAAGT ACAAAGAAAA GCGTCAATCT
AAGGTTAATA AAACTAAAAC TGTTGATTTG ATTGAATCAC AGCCAGTTGT GGAGAATTTA
ATTGGCGATC GCCAAGCAGA GCTACCCAGT GAAGTAGTAC GGACTAAATA TTTTCCTATG
CCCAGTATGA CAGTAGAGGA AGCCTTGGAG CAGCTACAAC TTATTGACCA TGATTTCTAT
ATGTTTTCCA ATGGAGTAAC AGGTGAAATT AATGTTATTT ACAAACGTTA CCATCATGGT
GGTTATGGTT TAATTCAACC ACGACCTAAT GGTAATGATA ATGGTAATAA TGGAAAAGTA
TCCGATAGTA TTGGTGAGGC AGCAGGCCTT AAATCTACTC ATATCTAG
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| Protein sequence | MKLVIQGKNI EITDSIHEYV NQKIEKAVNH FQQLTTEVDV HLSVARNPRI NPKQTAEVTI
YANGTVIRAQ ESSENLYASI DLVADKIARQ LRKYKEKRQS KVNKTKTVDL IESQPVVENL
IGDRQAELPS EVVRTKYFPM PSMTVEEALE QLQLIDHDFY MFSNGVTGEI NVIYKRYHHG
GYGLIQPRPN GNDNGNNGKV SDSIGEAAGL KSTHI
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