| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3169 |
|---|
| Symbol | |
|---|
| ID | 4243840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4837154 |
|---|
| End bp | 4838047 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638108178 |
|---|
| Product | indole-3-glycerol phosphate synthase |
|---|
| Protein accession | YP_722770 |
|---|
| Protein GI | 113476709 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.119969 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTC GTCGCCGTCC GCCAAACCCA GCGGTAGAAA TGGGCACTTT ACGCTATGAG
GTTTCCGTGC CAGAGTCAAA GCCTAAAAAT ATTCTAGAGG AAATAGTTTG GCATAAGGAA
AAAGAGGTAG ATTATTTGCG TGACAAAGAA CCTTTAGTTG AGTTAAGAAA AAAGATTAAC
TTAATGCCTC CTCCTCTGGA TTTTTTGACT ACATTATCAA CAGGAAAAAC TCAACTTGCT
GTAATAGCTG AAGTGAAAAA AGCTTCTCCT AGTAAAGGAG TAATTAGACA AGATTTTGAA
CCAGTTGCTA TTGCTAAGTT ATATCAGGAA AATGCTGCAA CTTGTATCTC AGTTTTAACA
GATAGAAAGT TCTTTCAAGG TAGTTTTGAA AATTTGGCAA ATATTAGGGA AAATGTTGAT
TTACCATTAC TTTGTAAAGA CTTCCTAATT TATCCATATC AAATATACTT TGCTCGCTTA
TATGGAGCTG ATGCTGTGCT ATTAATAGCA GCAATTTTAT CAGACCAAGA CTTAAAATAT
TTTATCAAAA TAGTTAATTC TTTAGGAATG ACAGCATTAG TTGAAGTTCA TACTTTGAAA
GAATTAGATC GGGTATTAGG AATAGAAGGG GTTAAGTTAA TTGGTATAAA TAATCGCAAC
TTAGAAGATT TTTCAGTGGA TTTACAAACA ACTTTTCAAC TGATGGAAGC TAGAAAGAAA
GAATTAGAAA AACTCGGAAT TTTAGTTGTA AGTGAATCTG GAATACATAG TTATGAAGAT
ATCAATTTTA TGATAAACGC TGGTGTAAAT GCTGTTTTAG TAGGAGAGTC TTTAGTCAAA
AAAACAAATC CAGGTACAGC ATTGCTACAA CTATTTAATG AAAATAAAAG TTAA
|
|---|
| Protein sequence | MQIRRRPPNP AVEMGTLRYE VSVPESKPKN ILEEIVWHKE KEVDYLRDKE PLVELRKKIN
LMPPPLDFLT TLSTGKTQLA VIAEVKKASP SKGVIRQDFE PVAIAKLYQE NAATCISVLT
DRKFFQGSFE NLANIRENVD LPLLCKDFLI YPYQIYFARL YGADAVLLIA AILSDQDLKY
FIKIVNSLGM TALVEVHTLK ELDRVLGIEG VKLIGINNRN LEDFSVDLQT TFQLMEARKK
ELEKLGILVV SESGIHSYED INFMINAGVN AVLVGESLVK KTNPGTALLQ LFNENKS
|
|---|
| |