| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3161 |
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| Symbol | pdxA |
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| ID | 4243832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4827852 |
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| End bp | 4828892 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638108170 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_722762 |
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| Protein GI | 113476701 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.551037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00845056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGACAG CCGTGAGTGA AATAAAAAGT CCAATTCCTC GTTTAGCAAT AACTATTGGA
GATCCTACAG GTATAGGACC AGAAATAGTT CTGAAAGCTT TAGCAGATCC GAAGGTGAGA
GAAAATTGTG ATTTGACAAT AGTTGGGAGT CGTCAAATTT TGCAAGAAAC TTACCAACAA
CTATCTCTGG AAAAACTTGT CTATTGGGAA AATTTGAAAA TTTTAGATGT AGAGTTTGAT
GGAAATTTAG AAGATATTTC TCTGGGGAAA GGTAATGCTG TGAGTGGGGA AGCTAGTTTT
TGTTACATAG AAACCGCGAT CGCCCAAACT TTAGCTGGAG AGTTTCAAGG TATTGTCACT
GCTCCTATTT CCAAAACCTG CTGGCAGATG GCTGGTCATA AATATCCTGG TCAAACAGAA
CTTTTAGCCG AAATTGCAGG AGTAAAAAAT TTTGGAATGT TATTTGTTGC CCACTCACCC
CACAGTAATT TTGTACTTCG TTCTCTTTTA GCTACCACAC ATATACCATT AAGTCAAGTA
CCAGCAGCTC TAACACCAGA GTTAATGAGT TGGAAATTAG AATTATTGGT GGAAAGTTTA
CAAAAGGATT TTGGTATTTC TAAACCAAAA ATTGCTGTTG CCGGTTTAAA TCCTCACAGT
GGAGAAAATG GACAATTAGG AACAGAAGAA GAAGATTGGT TAATTCCTTG GTTAGAGAAA
GAAAGCGATC GCCAACCAGA TATACAATTG TATGGACCTG TGCCACCGGA TACCATTTGG
GTTAAACCGG GTCTTGCTTG GCGAGGTTTA GAAGCATTGA CTTGCGATGC TTATTTGGCA
CTTTATCATG ATCAAGGTTT AATTCCAATA AAACTAATGG CATTTGATTT AGCTGTTAAT
ACTACTATTG GTTTACCATT TGTTAGGACT TCTCCTGATC ATGGTACAGC ATTTGATATA
GCGGGTCGAG GTATTGCTGA TGCTACGAGT ATGAAAGCAG CGATAAAGTT AGGAAAAGAG
TTAATTTTAC AAAGAATTTA G
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| Protein sequence | MKTAVSEIKS PIPRLAITIG DPTGIGPEIV LKALADPKVR ENCDLTIVGS RQILQETYQQ
LSLEKLVYWE NLKILDVEFD GNLEDISLGK GNAVSGEASF CYIETAIAQT LAGEFQGIVT
APISKTCWQM AGHKYPGQTE LLAEIAGVKN FGMLFVAHSP HSNFVLRSLL ATTHIPLSQV
PAALTPELMS WKLELLVESL QKDFGISKPK IAVAGLNPHS GENGQLGTEE EDWLIPWLEK
ESDRQPDIQL YGPVPPDTIW VKPGLAWRGL EALTCDAYLA LYHDQGLIPI KLMAFDLAVN
TTIGLPFVRT SPDHGTAFDI AGRGIADATS MKAAIKLGKE LILQRI
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