Gene Tery_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3110 
Symbol 
ID4244201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4761458 
End bp4762408 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID638108123 
Producttaurine dioxygenase 
Protein accessionYP_722716 
Protein GI113476655 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA TACCTCAAAC TCAGGAAAAT AAACATTTAG AGTCAAATGT ATATAATAAC 
TTTAATGTTT ATCCCCTCGC TGGACGTATC GGAGCAGAAA TAGTTGGACT TGATCTTAAG
CAGACTCTTA GCGATGAAAC AATTCATGAT ATTCGCCAAG TATTAATCAA GTATAAGGTA
ATTTTCTTTA GACAGCAAGA GCTTACTGAA ATAAGTCAGG TTGCCTTTGC CCGTCAATTT
GGGATTCTTA CCACTGCACA TCCACTACTT TCATCTTTAC CTGGTCATCC AGAGATCTTT
GACTTCGATT ATGGACGTAT GGACAACCGA ACTAATCAAT GGCATACGGA TGTGACATTT
ATTGATCGTC CTCCTTTTGC CTCAATTTTG CGTGCAGTTG AAATACCTGC CGTTGGAGGA
GATACAATCT GGGCAAATAC TGTGACAGCT TATCAAGATA TGCCTATACC ACTGCGTAAC
TTTGCTAACC AGCTTTGGGC GGTTCATAGC AATACATATA ATGACTATCT AGGGGCAACT
GCAAATATAT CGAAAAAACG ACAAGAACTA GGTAAAATTT TCACTTCAAT TGAATACCAG
ACATTACATC CAGTAGTTCA GGTTGTTCCT GATTCGGGTG AAAGAGGGCT GTTTATTGGT
GCTTTTGTCC GCCAACTTCA AGGTTTTTCG ATAAATGAAT CAATGCAGAT ACTGAAGATA
TTGCAATCCT ATATAATACG TCCGGAAAAT ACTGTACGTT GGCATTGGGA ACAAGGCGAT
ATTGCTTTCT GGGATAATCG AGTAACGCAA CATTATGGGA TCAATGATTT TGGTTCCCAG
CCTCGTCGTG TTCAACGGGT AACAATTGCG GGAAACTTAC CTATTAGCCT TGAAGGTATA
GAAAGCAAGT CAGTTAAGGG GGATGCCTCT GCCTATAACA GACTGAAATA G
 
Protein sequence
MSKIPQTQEN KHLESNVYNN FNVYPLAGRI GAEIVGLDLK QTLSDETIHD IRQVLIKYKV 
IFFRQQELTE ISQVAFARQF GILTTAHPLL SSLPGHPEIF DFDYGRMDNR TNQWHTDVTF
IDRPPFASIL RAVEIPAVGG DTIWANTVTA YQDMPIPLRN FANQLWAVHS NTYNDYLGAT
ANISKKRQEL GKIFTSIEYQ TLHPVVQVVP DSGERGLFIG AFVRQLQGFS INESMQILKI
LQSYIIRPEN TVRWHWEQGD IAFWDNRVTQ HYGINDFGSQ PRRVQRVTIA GNLPISLEGI
ESKSVKGDAS AYNRLK