| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3089 |
|---|
| Symbol | |
|---|
| ID | 4244180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4742285 |
|---|
| End bp | 4742875 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638108105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_722698 |
|---|
| Protein GI | 113476637 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0344] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.286384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCACGAT CGCATAGAAA AAATGTCAGT CATGTAGCAG GATGTATACT ACACATAAAG
ACATTGGTAG TATGTAAAGA TGCCAGCGCT CATTGCTATA TTGATATTTT CAAGGGGGTA
TTAGCGATCG CTTTGGTTCG CTATATTTAC TCTCTAGTGT TTGACCAAAA CCTAACTATT
GTTGCTGGAG TAACTGACAT TAATATAGCA AAAGAATGGA TGGTTATTTT AACAGGATTA
ATTGCTATAG TAGGTCATAC TAAATCTATT TGGATTGGTT TTAAGGGTGG CAAGCCTGTT
GCTTCTAGTC TGGGTATTTT GTTAGCAATG TCTTGGGTTG TTGGTTTAGG AACACTTTCT
GTATTTATTG TTGTTCTGAT GATTAGTCGT ATTGTTTCTT TGAGTTCTAT TATCGCTGCT
ATTACTGTTT CTGGTTTAAT GTTTTTGACA GGTCAATCAC TTCCTTATAG AACCCCTGAG
TGTATCTTTT TTTGCCGTTC AGGCGATCGC CAATCTCTTA AGCATAAGTC TAACAAAACA
AAGATTAATC TTGGTGGTGG CATTCTCAAG AGTTCCCATC AATTTTTTTG A
|
|---|
| Protein sequence | MSRSHRKNVS HVAGCILHIK TLVVCKDASA HCYIDIFKGV LAIALVRYIY SLVFDQNLTI
VAGVTDINIA KEWMVILTGL IAIVGHTKSI WIGFKGGKPV ASSLGILLAM SWVVGLGTLS
VFIVVLMISR IVSLSSIIAA ITVSGLMFLT GQSLPYRTPE CIFFCRSGDR QSLKHKSNKT
KINLGGGILK SSHQFF
|
|---|
| |