Gene Tery_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3082 
Symbol 
ID4244173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4738906 
End bp4739259 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content36% 
IMG OID638108101 
Productphage integrase-like SAM-like 
Protein accessionYP_722694 
Protein GI113476633 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGATA AACGGTCTCC TGCTACTAGA CATGGTTATG AAAGGGATTT AAAGGAATTT 
TTCAATTATG CAGTAGGTCA GTTACCCACA CCAGAAATAG TCCAACAGTT CTTAAACCTA
GACGAATTTA CAGCCAAACA AATAGTCTTG AGTTATCGAC GTTGGTTGTA TTCTAAAGAC
CTCAAACCAG CAACAGTAAA TAGAAAACTA GCAGCCATAA AAGCTTTAGT TAAGTATGCA
AAAAGAATAG GCAAGAGTTG TTATGACCTA ACTGACATAC AAAGTGATAA AGTAATTCCC
TACAGAGATA CAACTGGACT ACCAGTGTCA CAGATTACAG CAATTTTCAG GTAA
 
Protein sequence
MQDKRSPATR HGYERDLKEF FNYAVGQLPT PEIVQQFLNL DEFTAKQIVL SYRRWLYSKD 
LKPATVNRKL AAIKALVKYA KRIGKSCYDL TDIQSDKVIP YRDTTGLPVS QITAIFR