Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3022 |
Symbol | |
ID | 4244906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4672724 |
End bp | 4673209 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638108055 |
Product | TPR repeat-containing protein |
Protein accession | YP_722648 |
Protein GI | 113476587 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000246943 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAACTA AGATAATGAA TGAATCATTA ATTAAAGCAT TACTCAAAGA TTTACAAAAA TCTGATGAGT TGACTAGAAA TCAAGCTACA AGTGAACTGT GGAGAATTTG GTTTGAGGAA AAAGGTGTTG CTGGTTTAGA AGCAATTAGA CGCTCAGAAT ATTGGCTGCA GGTTGGAGAA GTTCAGCAGG GAAAAGAAAT TTTAAATCAA TTAATTGAGG ATATACCAGA TTTTGGAGAA GCTTGGAATC GAAGAGCGGT TCTTTATTAT ACTTTAGGAC ACTATAGGCA GGCAGTCAAG GATTGTGAAA TGGTAGTTAA GTTGAATCCT TTCCATTTTG GTGCTTGGCA TGGTTTAGGA TTATGTTATT TAGCATTGGA AGAATATCGA GAGGCTATTT TGGCTTTTAA AAAAGCTTTA GAAATTCAGC CTTATTCTAT TCAAAATCAG AGGTTTATTT TGGAATGTAC GGCGAGGTTG AGCTAG
|
Protein sequence | MTTKIMNESL IKALLKDLQK SDELTRNQAT SELWRIWFEE KGVAGLEAIR RSEYWLQVGE VQQGKEILNQ LIEDIPDFGE AWNRRAVLYY TLGHYRQAVK DCEMVVKLNP FHFGAWHGLG LCYLALEEYR EAILAFKKAL EIQPYSIQNQ RFILECTARL S
|
| |