Gene Tery_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3022 
Symbol 
ID4244906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4672724 
End bp4673209 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content35% 
IMG OID638108055 
ProductTPR repeat-containing protein 
Protein accessionYP_722648 
Protein GI113476587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000246943 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACTA AGATAATGAA TGAATCATTA ATTAAAGCAT TACTCAAAGA TTTACAAAAA 
TCTGATGAGT TGACTAGAAA TCAAGCTACA AGTGAACTGT GGAGAATTTG GTTTGAGGAA
AAAGGTGTTG CTGGTTTAGA AGCAATTAGA CGCTCAGAAT ATTGGCTGCA GGTTGGAGAA
GTTCAGCAGG GAAAAGAAAT TTTAAATCAA TTAATTGAGG ATATACCAGA TTTTGGAGAA
GCTTGGAATC GAAGAGCGGT TCTTTATTAT ACTTTAGGAC ACTATAGGCA GGCAGTCAAG
GATTGTGAAA TGGTAGTTAA GTTGAATCCT TTCCATTTTG GTGCTTGGCA TGGTTTAGGA
TTATGTTATT TAGCATTGGA AGAATATCGA GAGGCTATTT TGGCTTTTAA AAAAGCTTTA
GAAATTCAGC CTTATTCTAT TCAAAATCAG AGGTTTATTT TGGAATGTAC GGCGAGGTTG
AGCTAG
 
Protein sequence
MTTKIMNESL IKALLKDLQK SDELTRNQAT SELWRIWFEE KGVAGLEAIR RSEYWLQVGE 
VQQGKEILNQ LIEDIPDFGE AWNRRAVLYY TLGHYRQAVK DCEMVVKLNP FHFGAWHGLG
LCYLALEEYR EAILAFKKAL EIQPYSIQNQ RFILECTARL S