Gene Tery_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3016 
Symbol 
ID4244900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4665302 
End bp4667113 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content39% 
IMG OID638108051 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_722644 
Protein GI113476583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00236598 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTACGTG AATTTTCTTT TTCTTCTTGG TTTCGGAAAA CAGAAGAGAA TAACCTCCCA 
GATCAGGAAC GCCAGTCACC TTTAATATTC CGAACAATAG TCATAGTTTT ATTGACCACA
ACTACCATAG GTCTACAAGT GACTCGTCTG GCTCAAATAC AATTAATTCA AGGTCAACAA
AATAGGGAAC GAGCAGAAAA CAACCGAATT CGACCCATTC CAGTCCCTTC TAATAGAGGA
CTAATTCTAG ACCGTAATGG CAAAGCCTTT GCATCTAACC GTCTTAAGCA TGCCATATAT
TTATGGCCAA AAGAACAACC ATTACAGCAA TGGAAAATTA CTGCAGCTAA ACTCAGCCCC
ATTATTGATA TACCAGCCGA CAAAATTATT AAAAAAGTAG AACAGGCAAT TACTTCAGGA
GAAAGGAATA TACATCTTAG CGATCAAGTT AGCCGTAATA CTTTTATCAC TTTACAAGAA
AAGACTGGGG AGTTTCCTGG TGTAGAAGTT AGACCAGAGT CAACTCGTTA TTATCCTTAT
GGACAATTAG CATCCCATGT GATAGGATAT CTTGGTGAAG TTACACCAGC AGAACTAGAA
GCTAACCCAG AATACCAACT AAGAATGATG GTTGGTAGAA TAGGAGTTGA AGCTAGTGCT
AATGATGTAC TAGCAGGAAA ATGGGGTCAG GACTTGATAG AAGTCAATGC CCAAAACCGC
GAAGTAAGAA TTTTTGAAGA AGAAGAAAAA GAGGCTAAAA GTGGAAAAAC GGTCAAGTTA
ACCCTTGATA TAAACCTTCA AAAAGCAGCA GAAACAGCTC TGGGTTTTCG CAAGGGAGCA
GTAGTTGTGT TAGATGTGAA TACAGGGGAA GTTTTAGCAA TGGCAAGTTA TCCCAGATTC
AACCCCAATG TCTTTACAAA GCCTATGCCT GAAGAAAAAT GGCGAAGTCT TCACAGTGAA
GAACAATCAT TTTTAAATCG GTCTCTCCAA GGTTACCCTC CAGGTAGTAC ATTTAAAATA
GTTACTGCTG CTGCTGCTTT AGGGTCTGGC AAGTTTTCTC CCTACTCAAT TATTCAAACT
TCTGATTCTA TTTATGTTGG AGGTATTCTT TTCAATGAAC ATAGTGGGGG ATATGGTGCT
ATTGGTTTTA GAACTGCATT AGCTTATAGT AGTAATACTT TCTTTTATCA TGCTGGTATG
ACTATTGGTC ACGAACAGAT AGCTCAATGG GCATATAAAC TTGGTTTAGG GGGCAAAAAA
TTAAACCTTC TGGGCATACC TTCTGCATAT AATGGTCTCA TTCCTACTGA AGAAGATAAA
CGGAGAATTT ATAATGATGC CTGGTATTTG GGTGATACAA TTACAATGGC AATTGGTCAG
GGTTTGGTTT TGGTGACGCC TTTAGAGTTA GCAACAGCAA CAGCAACGAT CGCTAATAGT
GGTAAACAGG TTACACCTCA CTTGTTTGCA CATGAAACTA ACTCTCCAGA AATGAAACCT
ATTCCCATAG GGTTGAAACC AGAATATGTC AATACGATTA AAAAAGGAAT GATTGATGTT
GTTGAATACG GTACAGCACA ATTACTTAAT GATGGCACAA TTCCACTCAC AGGAGGAAAA
ACAGGTACAT CAGAAGTAAT GGGACAAAAG TCTCATTCAT TGTATGTGGG ATTTGGGCCT
GCCGAAGAAT CAAAAATTGC GATCGCTGTG ATTGTTGAAA ATGGTGGTTA TGGTTCTTTT
TCCGCTGCTC CAGTTGCGAA AAAGGTTTTT CAAACTTATT TCAGTAAATA TAGCCAAGCT
AAACTGAATT AG
 
Protein sequence
MVREFSFSSW FRKTEENNLP DQERQSPLIF RTIVIVLLTT TTIGLQVTRL AQIQLIQGQQ 
NRERAENNRI RPIPVPSNRG LILDRNGKAF ASNRLKHAIY LWPKEQPLQQ WKITAAKLSP
IIDIPADKII KKVEQAITSG ERNIHLSDQV SRNTFITLQE KTGEFPGVEV RPESTRYYPY
GQLASHVIGY LGEVTPAELE ANPEYQLRMM VGRIGVEASA NDVLAGKWGQ DLIEVNAQNR
EVRIFEEEEK EAKSGKTVKL TLDINLQKAA ETALGFRKGA VVVLDVNTGE VLAMASYPRF
NPNVFTKPMP EEKWRSLHSE EQSFLNRSLQ GYPPGSTFKI VTAAAALGSG KFSPYSIIQT
SDSIYVGGIL FNEHSGGYGA IGFRTALAYS SNTFFYHAGM TIGHEQIAQW AYKLGLGGKK
LNLLGIPSAY NGLIPTEEDK RRIYNDAWYL GDTITMAIGQ GLVLVTPLEL ATATATIANS
GKQVTPHLFA HETNSPEMKP IPIGLKPEYV NTIKKGMIDV VEYGTAQLLN DGTIPLTGGK
TGTSEVMGQK SHSLYVGFGP AEESKIAIAV IVENGGYGSF SAAPVAKKVF QTYFSKYSQA
KLN