Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3016 |
Symbol | |
ID | 4244900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4665302 |
End bp | 4667113 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638108051 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_722644 |
Protein GI | 113476583 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00236598 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTACGTG AATTTTCTTT TTCTTCTTGG TTTCGGAAAA CAGAAGAGAA TAACCTCCCA GATCAGGAAC GCCAGTCACC TTTAATATTC CGAACAATAG TCATAGTTTT ATTGACCACA ACTACCATAG GTCTACAAGT GACTCGTCTG GCTCAAATAC AATTAATTCA AGGTCAACAA AATAGGGAAC GAGCAGAAAA CAACCGAATT CGACCCATTC CAGTCCCTTC TAATAGAGGA CTAATTCTAG ACCGTAATGG CAAAGCCTTT GCATCTAACC GTCTTAAGCA TGCCATATAT TTATGGCCAA AAGAACAACC ATTACAGCAA TGGAAAATTA CTGCAGCTAA ACTCAGCCCC ATTATTGATA TACCAGCCGA CAAAATTATT AAAAAAGTAG AACAGGCAAT TACTTCAGGA GAAAGGAATA TACATCTTAG CGATCAAGTT AGCCGTAATA CTTTTATCAC TTTACAAGAA AAGACTGGGG AGTTTCCTGG TGTAGAAGTT AGACCAGAGT CAACTCGTTA TTATCCTTAT GGACAATTAG CATCCCATGT GATAGGATAT CTTGGTGAAG TTACACCAGC AGAACTAGAA GCTAACCCAG AATACCAACT AAGAATGATG GTTGGTAGAA TAGGAGTTGA AGCTAGTGCT AATGATGTAC TAGCAGGAAA ATGGGGTCAG GACTTGATAG AAGTCAATGC CCAAAACCGC GAAGTAAGAA TTTTTGAAGA AGAAGAAAAA GAGGCTAAAA GTGGAAAAAC GGTCAAGTTA ACCCTTGATA TAAACCTTCA AAAAGCAGCA GAAACAGCTC TGGGTTTTCG CAAGGGAGCA GTAGTTGTGT TAGATGTGAA TACAGGGGAA GTTTTAGCAA TGGCAAGTTA TCCCAGATTC AACCCCAATG TCTTTACAAA GCCTATGCCT GAAGAAAAAT GGCGAAGTCT TCACAGTGAA GAACAATCAT TTTTAAATCG GTCTCTCCAA GGTTACCCTC CAGGTAGTAC ATTTAAAATA GTTACTGCTG CTGCTGCTTT AGGGTCTGGC AAGTTTTCTC CCTACTCAAT TATTCAAACT TCTGATTCTA TTTATGTTGG AGGTATTCTT TTCAATGAAC ATAGTGGGGG ATATGGTGCT ATTGGTTTTA GAACTGCATT AGCTTATAGT AGTAATACTT TCTTTTATCA TGCTGGTATG ACTATTGGTC ACGAACAGAT AGCTCAATGG GCATATAAAC TTGGTTTAGG GGGCAAAAAA TTAAACCTTC TGGGCATACC TTCTGCATAT AATGGTCTCA TTCCTACTGA AGAAGATAAA CGGAGAATTT ATAATGATGC CTGGTATTTG GGTGATACAA TTACAATGGC AATTGGTCAG GGTTTGGTTT TGGTGACGCC TTTAGAGTTA GCAACAGCAA CAGCAACGAT CGCTAATAGT GGTAAACAGG TTACACCTCA CTTGTTTGCA CATGAAACTA ACTCTCCAGA AATGAAACCT ATTCCCATAG GGTTGAAACC AGAATATGTC AATACGATTA AAAAAGGAAT GATTGATGTT GTTGAATACG GTACAGCACA ATTACTTAAT GATGGCACAA TTCCACTCAC AGGAGGAAAA ACAGGTACAT CAGAAGTAAT GGGACAAAAG TCTCATTCAT TGTATGTGGG ATTTGGGCCT GCCGAAGAAT CAAAAATTGC GATCGCTGTG ATTGTTGAAA ATGGTGGTTA TGGTTCTTTT TCCGCTGCTC CAGTTGCGAA AAAGGTTTTT CAAACTTATT TCAGTAAATA TAGCCAAGCT AAACTGAATT AG
|
Protein sequence | MVREFSFSSW FRKTEENNLP DQERQSPLIF RTIVIVLLTT TTIGLQVTRL AQIQLIQGQQ NRERAENNRI RPIPVPSNRG LILDRNGKAF ASNRLKHAIY LWPKEQPLQQ WKITAAKLSP IIDIPADKII KKVEQAITSG ERNIHLSDQV SRNTFITLQE KTGEFPGVEV RPESTRYYPY GQLASHVIGY LGEVTPAELE ANPEYQLRMM VGRIGVEASA NDVLAGKWGQ DLIEVNAQNR EVRIFEEEEK EAKSGKTVKL TLDINLQKAA ETALGFRKGA VVVLDVNTGE VLAMASYPRF NPNVFTKPMP EEKWRSLHSE EQSFLNRSLQ GYPPGSTFKI VTAAAALGSG KFSPYSIIQT SDSIYVGGIL FNEHSGGYGA IGFRTALAYS SNTFFYHAGM TIGHEQIAQW AYKLGLGGKK LNLLGIPSAY NGLIPTEEDK RRIYNDAWYL GDTITMAIGQ GLVLVTPLEL ATATATIANS GKQVTPHLFA HETNSPEMKP IPIGLKPEYV NTIKKGMIDV VEYGTAQLLN DGTIPLTGGK TGTSEVMGQK SHSLYVGFGP AEESKIAIAV IVENGGYGSF SAAPVAKKVF QTYFSKYSQA KLN
|
| |