| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3012 |
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| Symbol | rplC |
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| ID | 4244896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4658353 |
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| End bp | 4659036 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108047 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_722640 |
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| Protein GI | 113476579 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00913494 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGTAGTTG GTATCCTTGG CACAAAACTA GGCATGACAC AAGTATTTGA AGCTGAAACT
GGAAAAGCAA TTCCTGTAAC AGTAGTTGAA GCTGGTCCAT GTGTAGTTAC CCAGATAAAA
ACAGAACAAA CAGATGGTTA CACTGCAGTT CAAATTGGAT ATGGTGAAGC CAAAAATAAG
ACTCGTCAAC TAAATACAAA AGAGCCAAAA GAAGTTAATA GGTATTTGAC TAATGCTCAA
GAAGGGCATT TAGTTAAATC TGGCGGTACT CCTTTACGTT ATCTACGAGA ATACAGAGTA
GATAATACAG GTAACTTTGA ATTAGGTCAA CAAATAAAAG TTGATTTATT TGAAGCAGGT
CAACTGGTTG ATGTCACAGG AAAAAGTATT GGAAAAGGCT TTGCTGGCTA TCAAAAACGT
CATAACTTTA GACGTGGACC AATGGCACAT GGTTCTAAAA ACCATCGTCT ACCAGGTTCC
ACAGGTCCGG GAACAACTCC AGGGCGCGTT TATCCAGGAA AGAAAATGGC AGGGCATCTA
GGAAATGTGC GAGTCACTAC TAGAAAACTG AAAATAGTAA GAATAGATCC CGAACGAAAC
CTATTACTAA TCAAAGGTAG TATTCCTGGA AAATCAGGCA CATTAATAAG TATTGCACCA
GCAAACATAG TAGGTCAAAA ATAG
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| Protein sequence | MVVGILGTKL GMTQVFEAET GKAIPVTVVE AGPCVVTQIK TEQTDGYTAV QIGYGEAKNK
TRQLNTKEPK EVNRYLTNAQ EGHLVKSGGT PLRYLREYRV DNTGNFELGQ QIKVDLFEAG
QLVDVTGKSI GKGFAGYQKR HNFRRGPMAH GSKNHRLPGS TGPGTTPGRV YPGKKMAGHL
GNVRVTTRKL KIVRIDPERN LLLIKGSIPG KSGTLISIAP ANIVGQK
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