Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3009 |
Symbol | rplB |
ID | 4244893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4656467 |
End bp | 4657330 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638108044 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_722637 |
Protein GI | 113476576 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.141186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00819024 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTATTC GTTCCTACCG ACCCTATACT CCAAGTACCC GAGAACATAG TGTTTCAGAC TTTGCGGAGG TAACAAAATC AAGACCAGAA AAAACTCTGG TAAAATTTAG ACATAGAAAA AAGGGTCGCA ACAACCGGGG TGTAGTTACC TGTCGTCATC GAGGCGGAGG TACTAAGAAA CTATATCGTG TTGTAGACTT CCATCGCAAT AAACATAATA TTCCAGCGAA AGTAGCAGCA ATAGAATACG ACCCCTACCG GAATGCCAGA ATAGCACTCC TACATTATCA AGATGGAGAA AAGCGCTATA TCCTCCATCC CTTAGGATTA AAAGTTGGTC AATTAATCAC CTCTGGGGTC AACGCTCCAC TAGAGATTGG TAATGCTTTA CCTCTAAGTA AAATTCCTTT GGGTACAGAT GTTCATAACG TAGAACTTGT TCCTGGTAAA GGAGGACAAA TGGTGCGTTC TGCTGGTGCT GTAGCTCAAG TAGTAGCAAA AGAAGATCAG TATGTAACAA TCAAACTTCC CTCTGGTGAA CGACGTAAAG TTAGAGCAAG CTGCTATGCA ACTTTAGGCC AAATAGGTAA TATAGAGCAT AGGAATATTA GTCTAGGTAA AGCAGGCCGT AATCGCTGGA AAGGTAAGAG ACCAACTGTT AGAGGTAGTG TAATGAACCC AGTTGATCAC CCTCATGGTG GTGGTGAAGG TCGGGCACCA GTTGGTAGAA GTGGGCCTGT TACTCCTTGG GGTAAACCAG CATTGGGCAT GAAAACTCGC AAGAAGAAAA AACAGAGTGA TGCTTTAATT GTACAACGTC GACGTAAATC CTCGAAAAGA GGTAAAGGTG GTCGTCAAAG CTAA
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Protein sequence | MGIRSYRPYT PSTREHSVSD FAEVTKSRPE KTLVKFRHRK KGRNNRGVVT CRHRGGGTKK LYRVVDFHRN KHNIPAKVAA IEYDPYRNAR IALLHYQDGE KRYILHPLGL KVGQLITSGV NAPLEIGNAL PLSKIPLGTD VHNVELVPGK GGQMVRSAGA VAQVVAKEDQ YVTIKLPSGE RRKVRASCYA TLGQIGNIEH RNISLGKAGR NRWKGKRPTV RGSVMNPVDH PHGGGEGRAP VGRSGPVTPW GKPALGMKTR KKKKQSDALI VQRRRKSSKR GKGGRQS
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