| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3007 |
|---|
| Symbol | |
|---|
| ID | 4244891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4655520 |
|---|
| End bp | 4655879 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638108042 |
|---|
| Product | 50S ribosomal protein L22P |
|---|
| Protein accession | YP_722635 |
|---|
| Protein GI | 113476574 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.148134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00691739 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATAG ATACCAATAC AGAAGTCAAA GCAATAGCGC GTTATATCCG AATGTCTCCG
TTTAAAGTAC GACGGGTGCT TGATCAAATC CGTGGCATTT CTTATAGGGA AGCATTAATT
ATCCTGGAAT TTATGCCATA CCGATCTTGT GTTCCGATCC GAAAAGTACT GTGCTCAGCA
GTAGCAAATG CGGAGAATAA CAAAGGAATA GATCCAGACA CTTTAGTTAT ATCCAAAGCT
TTTGCAGATC AAGGACCTTG CTTGCCACGT TATCGACCCC GTGCTCAAGG CCGTGCTTAC
AAAATCCGTA AGCCTACTTG TCACATTACA GTGGCAGTTG CTTCTTTAGT TGATGATTAA
|
|---|
| Protein sequence | MPIDTNTEVK AIARYIRMSP FKVRRVLDQI RGISYREALI ILEFMPYRSC VPIRKVLCSA
VANAENNKGI DPDTLVISKA FADQGPCLPR YRPRAQGRAY KIRKPTCHIT VAVASLVDD
|
|---|
| |