Gene Tery_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2998 
Symbol 
ID4245114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4650808 
End bp4651347 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content39% 
IMG OID638108033 
Product50S ribosomal protein L6P 
Protein accessionYP_722626 
Protein GI113476565 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.220968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0212963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAA TTGGTAAACT TCCAATCCCA ATACCTAAAA AAGTAACTAT TACTATTGAG 
GGTCAAAAAG TAACAGTAAA AGGCCCATTA GGTGAGCTGT CTAGGGTCTT GCCACCTGAG
ATAGCAGTGA AAGAACAAGA AAATACTATT ATTGTTAAAC CACAAGAACA ATCTCGTAGG
GCACGTCAGC GATATGGTTT ATGTCGCACT CTTGTTGCGA ATATGGTCGA AGGTGTATCT
AAGGGATATG AAAAACGACT GGTGATTCAA GGGGTAGGTT ATCGTGCCCA AGTTCAAGGT
AAGACTTTGG TATTAAATGT GGGTTACAGT AAACCAGTGG AAATGCCAGC TCCTGAAGGT
ATAAATATAG CTGTAGAAAA TAATACCAAC GTAATTGTTA ATGGTATTAA TAAAGAACTG
GTGGGAAATA CTGCCGCTAA AATCCGCGCC GTTCGTCCAC CAGAAGTATA TAAAGGAAAA
GGTGTTCGTT ATGCTGGAGA AGTAATTAAA CTTAAAGCGG GTAAGTCAGG TAAAAAATAA
 
Protein sequence
MSRIGKLPIP IPKKVTITIE GQKVTVKGPL GELSRVLPPE IAVKEQENTI IVKPQEQSRR 
ARQRYGLCRT LVANMVEGVS KGYEKRLVIQ GVGYRAQVQG KTLVLNVGYS KPVEMPAPEG
INIAVENNTN VIVNGINKEL VGNTAAKIRA VRPPEVYKGK GVRYAGEVIK LKAGKSGKK