Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2998 |
Symbol | |
ID | 4245114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4650808 |
End bp | 4651347 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638108033 |
Product | 50S ribosomal protein L6P |
Protein accession | YP_722626 |
Protein GI | 113476565 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.220968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0212963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGAA TTGGTAAACT TCCAATCCCA ATACCTAAAA AAGTAACTAT TACTATTGAG GGTCAAAAAG TAACAGTAAA AGGCCCATTA GGTGAGCTGT CTAGGGTCTT GCCACCTGAG ATAGCAGTGA AAGAACAAGA AAATACTATT ATTGTTAAAC CACAAGAACA ATCTCGTAGG GCACGTCAGC GATATGGTTT ATGTCGCACT CTTGTTGCGA ATATGGTCGA AGGTGTATCT AAGGGATATG AAAAACGACT GGTGATTCAA GGGGTAGGTT ATCGTGCCCA AGTTCAAGGT AAGACTTTGG TATTAAATGT GGGTTACAGT AAACCAGTGG AAATGCCAGC TCCTGAAGGT ATAAATATAG CTGTAGAAAA TAATACCAAC GTAATTGTTA ATGGTATTAA TAAAGAACTG GTGGGAAATA CTGCCGCTAA AATCCGCGCC GTTCGTCCAC CAGAAGTATA TAAAGGAAAA GGTGTTCGTT ATGCTGGAGA AGTAATTAAA CTTAAAGCGG GTAAGTCAGG TAAAAAATAA
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Protein sequence | MSRIGKLPIP IPKKVTITIE GQKVTVKGPL GELSRVLPPE IAVKEQENTI IVKPQEQSRR ARQRYGLCRT LVANMVEGVS KGYEKRLVIQ GVGYRAQVQG KTLVLNVGYS KPVEMPAPEG INIAVENNTN VIVNGINKEL VGNTAAKIRA VRPPEVYKGK GVRYAGEVIK LKAGKSGKK
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