| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2995 |
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| Symbol | rplO |
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| ID | 4245111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4649017 |
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| End bp | 4649502 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638108030 |
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| Product | 50S ribosomal protein L15 |
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| Protein accession | YP_722623 |
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| Protein GI | 113476562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.526656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0562332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATTAA AAGATGCAAT TCCAAAAAAA GGTTCCCAAC AGCGCGGTCG TAGAGTTGGC
CGGGGAATCT CAGCAGGTCA AGGTGCAAGT TGTGGTAAAG GGATGCGCGG TCAAAAATCT
CGTTCTGGTG GCAGTACTAG ACCAGGTTTT GAAGGAGGCC AAAATCCCCT ATATCGTCGC
TTGCCAAAAT TAAAAGGTTT TCCGATGGTA AATCGGAAAA AATACACGAT TATAAATGTT
AGTAAGTTAT CATCATTACC AGCTAACACT GAGGTAACTC TTGCTTCCCT GATTAAAGTT
GGAATTATTA CTACGGATGA TGGTCCACTT AAAATCTTAG GAGATGGAGA CTTAAACATT
CCACTTAAGG TTTATGCAGC AGCTTTTACA GCTTCAGCTC GGAGCAAAAT AGAAGCAGCA
GGTGGTAGTT GTGAAGAAAT TGGCCCTGCT CAAGCTGTCT CTAATGAGGA TTCAACAAAG
GAGTAA
|
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| Protein sequence | MRLKDAIPKK GSQQRGRRVG RGISAGQGAS CGKGMRGQKS RSGGSTRPGF EGGQNPLYRR
LPKLKGFPMV NRKKYTIINV SKLSSLPANT EVTLASLIKV GIITTDDGPL KILGDGDLNI
PLKVYAAAFT ASARSKIEAA GGSCEEIGPA QAVSNEDSTK E
|
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