Gene Tery_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2989 
Symbol 
ID4245105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4644681 
End bp4645076 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content46% 
IMG OID638108024 
Product30S ribosomal protein S11 
Protein accessionYP_722617 
Protein GI113476556 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.542716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.258691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAC AACCAACAAA AAAAACAGGC CCGAAAAAAC AAAAAAAGAA TGTGCCCAAT 
GGGGTAGCTT ACATCCAGTC TACCTTTAAT AATACGATTG TAACTATTGC TGACCTAAAT
GGTGAAGTAA TTTCTTGGGC TTCGGCAGGT TCAAGTGGTT TCAAGGGGGC CAAAAAAGGA
ACTCCCTTTG CAGCACAGAC AGCAGCAGAA AGTGCAGCAC GCCGAGCCAA CGATCAAGGA
ATGCGTCAGG TTCAAGTGAT GGTAAGTGGG CCAGGGGCAG GAAGAGAAAC TGCAATTAGA
GCTTTACAGG GGGCTGGTCT AGAAATAACT TTGATTCGAG ATATTACCCC AATTCCTCAT
AATGGTTGCC GTCCACCAAA ACGGCGTAGA GTCTAA
 
Protein sequence
MARQPTKKTG PKKQKKNVPN GVAYIQSTFN NTIVTIADLN GEVISWASAG SSGFKGAKKG 
TPFAAQTAAE SAARRANDQG MRQVQVMVSG PGAGRETAIR ALQGAGLEIT LIRDITPIPH
NGCRPPKRRR V