| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2988 |
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| Symbol | |
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| ID | 4245104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4643691 |
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| End bp | 4644656 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108023 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_722616 |
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| Protein GI | 113476555 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.146033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAGG GAGGTTACTC CGTGGCGCAA TTTCATTACG AGTGTGTAGA GTCTAAAACT
GACAAAGATC GAAGTCAGTA CGGAAAATTT ATTATAGAAC CACTAGCTCG TGGTCAAGGT
ACAACAGTAG GAAATGCACT AAGGCGGGTT CTGCTATCTA ACTTAGAAGG AACAGCTATT
ACATCAGTAA GGATAGCTGG TGTTAATCAT GAGTTTGCCA CAATTAAGGG GGTAAGAGAA
GATGTCCTAG AAATCCTACT GAATATGAAA GAGGTTGTTC TCAAAAGCTA TTCTGAGCAA
CCACAAATTG GCAGGCTGCG GGTAGAAGGA CCAGCGACAG TAACTGCTGA TCGATTTGAT
GTGCCTTCAG AGGTTGAAGT AATAGATCGC AGTCAATATA TTGCTACTCT ATCCCCAGGC
TCCATTCTGG AGATGGAATT TAGAATTGAG AAAGGAACTG GTTATAAAGC AGTAGATCGT
ACTCGTGATG ATGTGGCGAC TCTTGATTTT CTGCAAATAG ATGCTATTTT TATGCCAGTT
CGTAAGGTTA ACTATACGAT TGAAGATGCC CATATAGGTA GTTCTTTAGA ACAAGACCGA
CTAATTATGG ATATTTGGAC TAATGGCAGT TATACGCCTC AAGATGCCTT GAGTAATGCC
GCTGGTATTT TAATGAGTTT GTTTGAACCA CTCAAAGATA TTACCAATAT GGCAGATATT
CCATCAGGAG AAACGACAGA CCCAACAAGT CAGATCCCAA TAGAGGAATT ACAGTTATCA
GTTAGGGCTT ATAATTGTCT AAAAAGGGCT CAAATAAACT CAGTTGCAGA CCTGCTAGAT
TATAGTCAAG AAGATTTGTT AGAAATCAAA AACTTTGGTC AAAAGTCTGC AGAAGAAGTC
ATAGAAGCTT TACAAAAGCG CTTGGGAATA ACTTTACCTC AAGAAAAAGT AGCTAAAGCT
ACTTAG
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| Protein sequence | MEKGGYSVAQ FHYECVESKT DKDRSQYGKF IIEPLARGQG TTVGNALRRV LLSNLEGTAI
TSVRIAGVNH EFATIKGVRE DVLEILLNMK EVVLKSYSEQ PQIGRLRVEG PATVTADRFD
VPSEVEVIDR SQYIATLSPG SILEMEFRIE KGTGYKAVDR TRDDVATLDF LQIDAIFMPV
RKVNYTIEDA HIGSSLEQDR LIMDIWTNGS YTPQDALSNA AGILMSLFEP LKDITNMADI
PSGETTDPTS QIPIEELQLS VRAYNCLKRA QINSVADLLD YSQEDLLEIK NFGQKSAEEV
IEALQKRLGI TLPQEKVAKA T
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