Gene Tery_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2959 
Symbolera 
ID4245301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4596040 
End bp4596972 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content38% 
IMG OID638107996 
ProductGTP-binding protein Era 
Protein accessionYP_722593 
Protein GI113476532 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000390486 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0714001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGT CCACGAATAT AACTATTCCC GTAGCACCTG CGGGGTATAA ATCAGGGTTT 
GTTGGCATAA TAGGACGACC CAATGTTGGA AAATCTACTT TGATGAATCA ACTAGTGGGG
CAAAAAGTTG CTATTACCTC CCCAGTTGCT CAAACTACTC GTAATCGTCT GCGTGGTATT
TTGACTACAC AAGCAGCTCA GATAATTTTT GTTGATACCC CAGGTATTCA TAAGCCTCAG
CACCAACTAG GAAAAGTATT AGTTCAAAAT GCTAAAGTAG CAATTCAATC TGTAGATTTA
GTTTTGCTGA TAGTAGATGG ATCAGTAATA GCAGGTGGAG GCGATCGCTA TATTATAAAT
TTACTGGATA AAATCCAAAC TCCTGTAATT TTAGGTATGA ATAAATTAGA CCTACAACCT
CAAGATGCTT GGAAAATAGA AGCTAGTTAT TATCAATTAA TCCATCCTCA CCCCTGGCAA
ATAATCAAAT TTTCTGCTGT CACAGGAGAA GGAGTAGAAA TACTACAAGA TTTATTGATT
GAACAGATGG AAACTGGACC TTATTATTAT CCTCCTGATT TAGTAACAGA CCAAGCAGAA
CGCTTTATTA TGGGGGAGCT GATCCGGGAG CAAATTTTAT TGTTGACTCG TGAGGAAGTA
CCCCACTCAG TAGCGATTGC TATTGACAGA GTAGATGAAG AACCAACTAT TACTCGTATT
CTTGCCACTA TTAATGTGGA ACGTTCATCT CAAAAAGGAA TTCTAATTGG TAAGGGTGGG
AATATGTTAA AAGCTATTGG TAGTGCGGCA CGTCAACAAA TTCAAAAGTT AATTGCAGGT
AAGGTGTATT TGGAGCTATT TGTAAGAGTA CAGTCTAAAT GGCGACAGTC TCGAATTCAG
TTAGCTGAGT TAGGATATCA GGTTGAAGAA TGA
 
Protein sequence
MELSTNITIP VAPAGYKSGF VGIIGRPNVG KSTLMNQLVG QKVAITSPVA QTTRNRLRGI 
LTTQAAQIIF VDTPGIHKPQ HQLGKVLVQN AKVAIQSVDL VLLIVDGSVI AGGGDRYIIN
LLDKIQTPVI LGMNKLDLQP QDAWKIEASY YQLIHPHPWQ IIKFSAVTGE GVEILQDLLI
EQMETGPYYY PPDLVTDQAE RFIMGELIRE QILLLTREEV PHSVAIAIDR VDEEPTITRI
LATINVERSS QKGILIGKGG NMLKAIGSAA RQQIQKLIAG KVYLELFVRV QSKWRQSRIQ
LAELGYQVEE