Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2953 |
Symbol | |
ID | 4245295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4588813 |
End bp | 4590948 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638107991 |
Product | TPR repeat-containing protein |
Protein accession | YP_722588 |
Protein GI | 113476527 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0781794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTTT CTAAGACAGC CATCTTAACC CTTACTGCCC TCAGTTCCCA AAATTTAGCT ACAGAGGCAA AAGTTACTCC TAATACTAAT CCATATTTTC AGACAACTGC ACCAGAGAAT ATTAATCTTA CTAACTCTAT TAATGTTATT ACTGTGCCTT CCACAAAATC AATTAGCCCC CCAGAAATAT TAGTCAGCCA AGCCTATAAT AACCTTAACC TTAAGACTAC TTTATCAACT CCAAATATAC ATCAAATTAA AAGAACTTTA AACAATAGTT GGTTAGGGAA AATAGTAAAG TTTTCAGCAA AAAATAATTA TCAATTCCAG CAATTTGCTG AACAAATGGC TTTAAAAACA GATTTAGAAT CAGAAGCTAG TCTCAATCTT AATCCTACCC TAACTTTATT GAATACTTTA TTATTAGTTG CAACTTTATT ACCTCCTATA ACTATAGGTT TTTTTTGGCT CATCAGAAGA TTGGTAATTA AAGAATTAGT AGGTGAAGTT AATAAGAGGT TAACAAAAAT AAGTCAATTA GAATTAAGTC TGAATCAATC TCAAAAATTA TTTACTGAAT TAGAGAGTCA TATAGTGACT GCAAAACAAT CAATTGATTT TCTGCATCAA GAAGCTAAGA TATCAAAATC ATCTGTAGAA CAAATAGAAG TTCTGAAGTC TCAGTTTTTA ATGCAACTGC AAGTGATTAT TTCTGAGGCT CAAGAAGCCA AACATCAAGC TATTCAAGAA ATTAATTATT CTGTCAATTC AGAAACTAAA TCTGTTAAAA ATACCCAGAA ATTAAAATCC TCTGAAAAGC AGCCTACTAT GATTGCTGAT GATTATTTTA AACTAGGAGA AAAACAATTT TATGATGGTC AATATAATCA AGCTTTAGCA AATTTTGAAA AAGCTATTTC TCTTAATTCT TATTTAAGTG AAGCTTGGTT TAAGTCTGGT AATGTATTTG TAAAATTGCA CCGTTATTCT GACGCTCTTG CTGCTTACGA TCATGCTATT GCAATTCATT CTGATAGATT TGAATATTGG TTTAATCGTG GCAATGTATT TGTCAAGTTA GAACGTTATT CTGAGGCATT AGCTTCCTAT GATAAAGCTC TTTCTCTTAA TCAAAATCAT GTAGAAATTT GGCTAAACCG AGGTATTTTA TTCAGGAAAT TACAACGGTA TAATGAAGCA GTTGTTTCAT ATCAAAAAGC TATTTTAATC CAGCCTAAAA ATGTTGATAT TTTGCATAAT TTGGGTGCTT TATTAGGAAA GTTAGAGCGC TATGAAGAAG CAATCACTAC TTTTGACCAA GCTCTGAAAA TTCAACCAAA TAAATTTGAA ATTTGGTATA ACCGAGGCAA TTTACTGGGA AGGATACAAT CTTTTAACGA GGCAATTAAT TCTTATGACA AAGCACTAAA AATTAAACCA GATAGGTATG AAATTTGGTA CAACAAAGGT GCTATTTTAT GGCAAATAGA AAAATATCAA GAAGCAGTTA ATTGTTACGA CCAAGCAATT AATTTAATGC CAGATGATTA TGAAGTTTGG CATAATAGAG GAGTAGCTTT AGGTGCTTTG GAAAAGTATC AGAAAGCAGT TAATTCTTAT GATAAAGCAA TTAAAATTTA CCCCCAATGT TATCAAGCTT TTATCGGTAA AGCAGAAACA TTATTGAAGT TAGAACAATA TGAGGAAGCT TTAAGTTCTT GTAATCATGC TATTGCTATT AAAAAGGAAC GTTATGAAGG TTGGTTATGT CAAGGTCGGG TATTAGAAAA ATTGACAAGT TATGAAGAAG CTTTGATGGC TTATGATCAA ACAATTGCTA TTAATGATAA TAGTTATGAA GCTTGGGCAA GAAAAGGTAT GGTCTTAGAA AAAATTAAAC GCTATCAAGA AGCTTTAATG TGTTATGACC GGGCTATTGC GATTAAACCG AATGATTCAG AATCTCAGCT AAAACGTCGT AAATTATTGT CAGAATTACA AACAGAAGGA ATTTTCACTG AGGCAAATAA ATATAATTTA CAACTCAATT TAGATGTTAG TAATAACCAA GATAAAAAAC TCAAAAAAAA TCAAAAAAAT TATCCGTATC TTGCACAGAA GGGAAGAAAG AGCTAA
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Protein sequence | MNLSKTAILT LTALSSQNLA TEAKVTPNTN PYFQTTAPEN INLTNSINVI TVPSTKSISP PEILVSQAYN NLNLKTTLST PNIHQIKRTL NNSWLGKIVK FSAKNNYQFQ QFAEQMALKT DLESEASLNL NPTLTLLNTL LLVATLLPPI TIGFFWLIRR LVIKELVGEV NKRLTKISQL ELSLNQSQKL FTELESHIVT AKQSIDFLHQ EAKISKSSVE QIEVLKSQFL MQLQVIISEA QEAKHQAIQE INYSVNSETK SVKNTQKLKS SEKQPTMIAD DYFKLGEKQF YDGQYNQALA NFEKAISLNS YLSEAWFKSG NVFVKLHRYS DALAAYDHAI AIHSDRFEYW FNRGNVFVKL ERYSEALASY DKALSLNQNH VEIWLNRGIL FRKLQRYNEA VVSYQKAILI QPKNVDILHN LGALLGKLER YEEAITTFDQ ALKIQPNKFE IWYNRGNLLG RIQSFNEAIN SYDKALKIKP DRYEIWYNKG AILWQIEKYQ EAVNCYDQAI NLMPDDYEVW HNRGVALGAL EKYQKAVNSY DKAIKIYPQC YQAFIGKAET LLKLEQYEEA LSSCNHAIAI KKERYEGWLC QGRVLEKLTS YEEALMAYDQ TIAINDNSYE AWARKGMVLE KIKRYQEALM CYDRAIAIKP NDSESQLKRR KLLSELQTEG IFTEANKYNL QLNLDVSNNQ DKKLKKNQKN YPYLAQKGRK S
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