Gene Tery_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2875 
Symbol 
ID4244946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4478487 
End bp4479398 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content37% 
IMG OID638107924 
ProductROK domain-containing protein 
Protein accessionYP_722521 
Protein GI113476460 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID[TIGR00744] ROK family protein (putative glucokinase) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0985025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTC TAGTTATAGG CATTGATATA GGAGGAACAT CTATCAAGTT GGGATGTTTC 
GGTAGGGATG GAGTATGTCA TCAATCTTTA ACTGTTCCAA CTCCTCGACC TGCTACTCCA
AAAGCAGTTA TTGATCTAAT AAAAGAGGTA ATATCTATGA TGATAAAAGA ACCTCAAATA
TACAACTTAG GACCTATTCA AGGAATAGGT ATTGGAGTAC CAGGTCCTGT TGATGCTGAA
GGTAAAACTT CTATCATAGC AATTAATTTA ACAGATTGGC AAGATGTTCC TCTCGCTAAA
TTGTTAGAGG AAAAAACTGG TTTACCAGTA GTTATAGCTA ATGATGCTAA CTGTGCTGGT
TTAGGAGAAG CTTGGTTAGG GGCAGGTAGT CAGTATAAAA ATCTGATTAT GCTTACCCTG
GGTACTGGTG TCGGAGGAGC AATTATATTA AATAGCCAAT TATTTGTGGG TCATCAAGGT
GCCGCTGGAG AGTTAGGCTT AATAACTTTA AACCTCGATG GACCTAAATG CAATAGTGGC
AATAATGGTT CTTTGGAACA ATATATTTCT GTTCAAGCAG TTCGTCGAGA GACAGGAAAA
GAACCTTTAG AATTAGCCAA TTTAGCTTTG GCTGGAGATA AATTTGCTCT AGAATTTTGG
CAAAATTACG GACGACTTTT AGGAGCTGGG TTAGCAAGTT TAATTTATAT TTTAACTCCA
GAAGCAGTGA TTATTGGTGG TGGAATAAGT GCTGCAGCAA AACTTTTTTT ACCTGCGACT
AAGGCAGAAG TTAAGCGACG AGTTCTTCTG ACTTCTTCTT TAAAGTTACA ATTATTAATT
GCTAAATTAG GTAATCAAGC TGGTGTTATT GGAGCTGCTA AGTTAGCTTG GACTAAGTTT
TCAGATCAAT GA
 
Protein sequence
MNSLVIGIDI GGTSIKLGCF GRDGVCHQSL TVPTPRPATP KAVIDLIKEV ISMMIKEPQI 
YNLGPIQGIG IGVPGPVDAE GKTSIIAINL TDWQDVPLAK LLEEKTGLPV VIANDANCAG
LGEAWLGAGS QYKNLIMLTL GTGVGGAIIL NSQLFVGHQG AAGELGLITL NLDGPKCNSG
NNGSLEQYIS VQAVRRETGK EPLELANLAL AGDKFALEFW QNYGRLLGAG LASLIYILTP
EAVIIGGGIS AAAKLFLPAT KAEVKRRVLL TSSLKLQLLI AKLGNQAGVI GAAKLAWTKF
SDQ