| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2862 |
|---|
| Symbol | |
|---|
| ID | 4244933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4462676 |
|---|
| End bp | 4464022 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638107911 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_722508 |
|---|
| Protein GI | 113476447 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.375816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCAG CTTTAACTCC AGAAATGTCG GCTTTTAGTT TATGTCAAGA AGCAGAGTCT
CATTTAAAAG CAGAAAAATT AGATGAGGCT TTTTTGGCTT GTGAAAAAGC TCTAGAAATA
TTACCATTCT ATGCTTTAGC TTGCAAAAGT ATGGGAAATG TATTGCAGGC TATGGGAAAG
TTAGATGAAG CAATAAATTA CTATGTACAA GCAATTATGC AACAACCAAA TTGGGCGGAA
GTTTATACAA ATATTGGTAG TTTATATGCT AAACAAAAAG AGTGGGAACC AGCTATCGCT
TGTTATAGAA CAGCTATTGA ATTACAACCA AATTTTACTG GTACTTATCG TAATTTATCT
CGGCTTTATC AACAGTTAGG AGATTTGGGT TTAGCCAAAA AATATTGGTA TTACGGAAAA
AAAATAGAAT CAGAAAAAAA AGCATTAGAA AAGCTAAATA AGGGGGATGT TTTATTTAGT
AAAGGAAAAA TAAAAGAGGC GATCGCTGAT TATTTTGAGG CTATAGAATT AAATCCTACT
TTATCGGATG CTTACTCGAA ATTAGCAGAA ATTTTAGTAA ATCAGGGAGA ATTAGATGCA
GCAATAGATT GTTATCAAAG TTTAAGTAAA CTATTACCTG AAAATTGGTT AATTCTTCAT
AAACTAGGAA AAATTTTCCG AGAAACAGGT AAGTTAAATG ATGCAGTAGA AGTATTTAAA
CGTGCTATAG AAATTAATCC AAAGTTTCCT TGGTCTTACA AAAATTTAGC AGATATTTTG
TATGAACAAG GTAAGTTAAA TCAAGCCCTT ACTTGTTATC GTAAACTGAT TAAAAATGAT
CCTAATATTT GGGATGCTTA CTGTAAAATT GGAGAAATAT TGGTCAAACA AGGAAAAATA
AATCAAGCAG TTGTTGTCTA CCGTAAAGGT ATCAAACTTA ACCCACATTT AGCTAAGTTT
CACTATCTAT TAGGGGAAGC ACTGGGTAAA CAAAAAAAAT GGGGGTCAGC AATTAAAGTT
TATAGTAAAG CGATAGAGTT AAAAGCAAAT AATCATTTAT TTCATCGTAG TTTAGCAAAT
GCTTTGCAGG AGCTTGGGAA ATTAGATGAG GCTATTATTA GTTATCGAAA AGCTATAGAA
ATTAATTCTA ATTCTTGTTG GTTATACGCA TCATTAGGAA AAGTATATAT TCAACAAAAA
AATTGGTCTG ATGCTATCGA ATGTTTTAGA GAAGCAATAC AAATTAAACC AGACTATGAT
AAAGCTTACG AAAAAATAGC CTATATCTTT GAGCAGCTAG GTGACAGTGA AGCTGCAGAA
AAATGGAGAA ATAAAGATAA TTTATAA
|
|---|
| Protein sequence | MYSALTPEMS AFSLCQEAES HLKAEKLDEA FLACEKALEI LPFYALACKS MGNVLQAMGK
LDEAINYYVQ AIMQQPNWAE VYTNIGSLYA KQKEWEPAIA CYRTAIELQP NFTGTYRNLS
RLYQQLGDLG LAKKYWYYGK KIESEKKALE KLNKGDVLFS KGKIKEAIAD YFEAIELNPT
LSDAYSKLAE ILVNQGELDA AIDCYQSLSK LLPENWLILH KLGKIFRETG KLNDAVEVFK
RAIEINPKFP WSYKNLADIL YEQGKLNQAL TCYRKLIKND PNIWDAYCKI GEILVKQGKI
NQAVVVYRKG IKLNPHLAKF HYLLGEALGK QKKWGSAIKV YSKAIELKAN NHLFHRSLAN
ALQELGKLDE AIISYRKAIE INSNSCWLYA SLGKVYIQQK NWSDAIECFR EAIQIKPDYD
KAYEKIAYIF EQLGDSEAAE KWRNKDNL
|
|---|
| |