| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2841 |
|---|
| Symbol | |
|---|
| ID | 4245144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4415949 |
|---|
| End bp | 4417862 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638107891 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_722488 |
|---|
| Protein GI | 113476427 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.31108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAA CTTTTGACTT CCAAGATGAA TACGACATCA TCGTAGTAGG CGCAGGCCAC
TCTGGGTGTG AAGCTGCTCT CGCTACTGCA CGCCTCGGTT GCCACACCCT ACTACTAACT
CTAAACCTTG ACAAAATTGC TTGGCAACCA TGTAACCCGG CTGTTGGGGG ACCTGCAAAA
TCTCAACTTA CCCATGAAGT GGATGCCTTG GGTGGAGAAA TAGGTAAAAT GGCAGACCGC
ACCTACCTGC AAAAACGTAT TCTCAATTCT TCTCGCGGAC CTGCCGTTTG GGCGTTACGA
GCTCAAACCG ACAAACGAGA ATACGCTACC ATTATGCGTA ACATTGTCGA AAACCAAGAA
AACCTCAGAG TTCGCGAAAG TATGGTAACA GACTTAGTTT TGGGAGATAA CGAGGAAATT
ATTGGAGTTG AAACCTACTT CGGCGTCGCC TTTAAATGTA AAGCTGTCAT CCTGACCACA
GGAACTTTCC TTGGTGGAGT TATCTGGGTA GGCAATAAGT CAATGCCTGC GGGCCGCGCC
GGAGAATTTT CTGCTATTGG TCTGAGTGAA ACCCTAAATA AACTTGGTTT TGAAACCGGA
CGACTAAAAA CAGGTACTCC TGCCAGAGTT GACAAACGTT CTGTTGACTA CACCGACCTG
GAAGCTCAAC CAGGAGATGA AAAAGTACGT TGGTTTACCT TCGACCCAGA AGTCTGGGTG
GAAAGAGAAC AGATGTGTTG CTACCTGACA CGCACTACTC CAGAAACTCA CAAGTTAATT
CGCGATAATT TGCATTTGTC TCCTGTTTAT GGTGGGTGGG TGGATGCGAA AGGTCCGCGC
TATTGTCCGA GTATTGAAGA TAAAATTGTC CGGTTTGCGG ATAAACATAG TCATCAAATA
TTTATTGAGC CCGAAGGTCG TGATATTCCT GAACTTTATA TTCAGGGGTT TTCTACTGGT
TTGCCAGAGA AATTACAACT GCAAATGTTG CAGAGTTTAC CTGGTTTAGA AAATTGTTTG
ATGTTACGAC CTGCTTATGC GGTAGAATAT GATTATTTAC CTGCTACCCA ATGTTATCCG
ACGTTGATGA CTAAGAAAAT TGAAGGGTTA TTTTGTGCTG GTCAAATTAA TGGTACGACT
GGATATGAAG AAGCAGCAGC TCAAGGTCTT GTGGCGGGAA TAAATGCAGT TAAATTTGTT
AAGAATGAAG AGATGATTAT TTTCCCACGG GAACAAAGTT ATATTGGTAC TTTAATTGAC
GATCTATGTA CAAAAGATTT GCGAGAACCC TATCGAATGT TAACTAGTCG TTCGGAATAT
CGTTTGATTT TACGGTCGGA TAATGCTGAC CAAAGATTAA CTCCTTTGGG TAGAGAAATT
GGTTTAATTG ATGACCGTCG GTGGGAGTTA TTTGAGAGTA AACAAGCTAA TATTAATTCT
GAAAAATCTA GGTTAAATTC AACTCGAATT AAAGAACTAG ATGAGGTTGC TATTAATATA
GTCGCTGATA CTCATACAAA AATTAAGGGT TCGATTACTT TAGCAGATCT GTTGCGTAGA
CCTGGTTTCC ATTATGTAGA TTTGGAAAAG TATAATCTGG GGAATTTAGA TTTAAAATTA
GTTGAAAAAG AGGGCGCAGA AATTGATATT AAATATTCCG GTTATTTGCA AAGACAACAG
AATCAAATTG ATCAAATTAG TCGTCAAAAA AATCGTAGGT TACCTACTAA TTTAGATTAT
TTATCTATTT CTACTTTATC CCTAGAGGCA CGGGAAAAAT TATCGAAAGT TCAGCCTTTA
ACTATTGGTC AAGCATCTCG AATTGGTGGA GTAAATCCGG CGGATATTAA TGCTTTATTA
GTTTATTTAG AGGTGCAATA TCGACAGTTT CAATTAACTT CTGCTAATGT TTAG
|
|---|
| Protein sequence | MNQTFDFQDE YDIIVVGAGH SGCEAALATA RLGCHTLLLT LNLDKIAWQP CNPAVGGPAK
SQLTHEVDAL GGEIGKMADR TYLQKRILNS SRGPAVWALR AQTDKREYAT IMRNIVENQE
NLRVRESMVT DLVLGDNEEI IGVETYFGVA FKCKAVILTT GTFLGGVIWV GNKSMPAGRA
GEFSAIGLSE TLNKLGFETG RLKTGTPARV DKRSVDYTDL EAQPGDEKVR WFTFDPEVWV
EREQMCCYLT RTTPETHKLI RDNLHLSPVY GGWVDAKGPR YCPSIEDKIV RFADKHSHQI
FIEPEGRDIP ELYIQGFSTG LPEKLQLQML QSLPGLENCL MLRPAYAVEY DYLPATQCYP
TLMTKKIEGL FCAGQINGTT GYEEAAAQGL VAGINAVKFV KNEEMIIFPR EQSYIGTLID
DLCTKDLREP YRMLTSRSEY RLILRSDNAD QRLTPLGREI GLIDDRRWEL FESKQANINS
EKSRLNSTRI KELDEVAINI VADTHTKIKG SITLADLLRR PGFHYVDLEK YNLGNLDLKL
VEKEGAEIDI KYSGYLQRQQ NQIDQISRQK NRRLPTNLDY LSISTLSLEA REKLSKVQPL
TIGQASRIGG VNPADINALL VYLEVQYRQF QLTSANV
|
|---|
| |