Gene Tery_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2828 
Symbol 
ID4245131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4394349 
End bp4396478 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content43% 
IMG OID638107878 
Productprotein kinase/helix-hairpin-helix DNA-binding domain-containing proteins 
Protein accessionYP_722475 
Protein GI113476414 
COG category[R] General function prediction only 
COG ID[COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.647129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.367028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGC AACGTCAGTT CAGTGAACAA ATTATAACCT TGGATACCCA AAACCCCATT 
GGTGGGGGTG GTGAAGGTCG TATCTATCCT GTGCTCAAAA ACCCCTCCTT AGTGGCCAAA
ATTTACCATA AACCGACAGA CGAGGACGCC GATAAACTGA CCGTAATGTT CTCTCATCCA
CCAGATGTAC CCATAGGAAG CGGACATGCA GCGATCGCAT GGCCTATAGA TCTATTGCGC
ACTACTAATA ACAAACATCA AATAGTTGGT TTTTTAATGC CTCGGGTTTC CAGAGCACAA
CCCCTACATA TATTCTATAA CCCTCGCAAC CGTCGAGAAC AAAAACCTCT TTTCAACTAT
CGTTACCTCC ATCGCACAGC TCGTAACTTC GTCGCAGCCG TGAACGCTTT ACATAACAGT
GGATATACTA TTGGTGACAT CAATGAATCA AATATTCTCG TCACCGATAC TGCTCTTGTT
ACCCTAGTTG ACACAGACTC CTTTCAAGTG CGCGACCCCT ACACCAAAGA AATTTACCGT
TGCCCCGTCG GCAAACTAGA ATTTACTCCC CCAGAACTAC AAGGTCAGAG TTTCCGGAAA
ATTGACCGCA AACCTGAACA TGACCTATTT GGCATGGCAG TATTAATATT TCAACTTTTG
ATGGAGGGAA CTCACCCTTT TGCAGGAATT TACAAAGGTA GAGGAGAACC CCCCAACCTT
GAAGCTCGGA TCCAGGCTGG TCATTTTCCC TATAGTCAAA AGCGAGTTCC CTATCGCACG
ACTCCAACGG CACTACATTG GGAAATTTTA CACCCCACTA TACAAGAGCT ATTCATTAAC
TGTTTTGAGT TAGGGCATGA ACGCCCAGAG TTGCGCCCAG ATGCTAAGGC TTGGTTACAG
GGGTTGCGAG AGTCAGAAGA TAGTCTAGTG CACTGTCAAA AAAATCATCA GCATTGGTAT
GGAAACTACC TAAAGTCTTG TCCTTGGTGC GCGCGGACTA AACTTTTAAA AGGACGAGAC
CCTTTTCCAT CAAGGGAAGC AGTTAGAAAT AAGCAACATT TGGAACCTGC TCTCAAAAAA
GGGAAACTTT TACCTTTAAA GTCACCAAAA GCTACTCCTT CTCAAAAACC AGCTCCACCA
AAACCAATTG TGATCACTCG ACCCATGGGG CAATATCAAC CTTTACTGAC TCCTGTTGTT
ACTAAATTTA AGCCCCCCTC TTTACCAATA ATTCCTTTGC CAGGGGGTGG TAAAGGTCTT
CTTGGTATTG CTCAAGATGC TATTTTTGGT GGTTTTTGGG GAGTTTTGCT GGCGGCGGCA
GTAGCAGGTC TGGTCTTAGG CATAGTTAAC AGTAGCATTG CTATTTTAGG TGGTGTTGTT
ATGGGAATAT TTTGGGGTGC TTTTTTCGCG ATCGCTTGCC AATATGTTAT CCCTATGAAC
TCATCTAGTG CTAGTTTAGG TTTAACAGGG GGGCTCTGGG GAGGGTTTCT GGCTGCTGCT
ATTACTGGTG CTGTTTATGG AATAGGTAAC CGTCTTGGTG CATTTGGCCA AGCAGTCGTA
TTAGGAGGAT TTTTAGGTAC TATTTGGGGT AGTGTTTGGA GTTATTTTAA ACCACCTTTA
GCGTTTCCTG TTCCTGGGCG AGTTTTGGGT AGACGAGGTT TATTTTTAGG TGTAATTTGG
GGTGCTTTTT TAGGTACAGT TATTGGAGCT ATTTTAGCTG GAATTTTTGT CTTTCAGGAA
GCTATGAATG ATAATAGTAA TTCTTGGGAT GAATTGGTAT CTATATTAAT AAGTAGTATG
ATTTCGGCAA TGGGTGTCGG TGCTATGGGT GGAGTTATAG GGGGTGTAAT TTTAGGACCA
ATTTTAGGTG CTCCTACTTT GCCTTTGTCT AATAATTTAT CCGGGGCTAG AGGTGCTTTA
TTAGGTGGAA TTTGGGGGTG TTTTTTAGGT ACAATTATTG GCATAATTTG CGGTGGTTTT
TTACCACAAA TAGTGTCAAT AGACTTAGTA GAAATTATGC GAGTTAATGG AGACTGGACT
TCAATTTTTT CAACAATTTT TGGAGCTGGT TTAGGTGCTC TTTGTGGCTG TTTTTCTGGG
GCAACTTGGG GTTCTATGGG GAAATGGTAA
 
Protein sequence
MRLQRQFSEQ IITLDTQNPI GGGGEGRIYP VLKNPSLVAK IYHKPTDEDA DKLTVMFSHP 
PDVPIGSGHA AIAWPIDLLR TTNNKHQIVG FLMPRVSRAQ PLHIFYNPRN RREQKPLFNY
RYLHRTARNF VAAVNALHNS GYTIGDINES NILVTDTALV TLVDTDSFQV RDPYTKEIYR
CPVGKLEFTP PELQGQSFRK IDRKPEHDLF GMAVLIFQLL MEGTHPFAGI YKGRGEPPNL
EARIQAGHFP YSQKRVPYRT TPTALHWEIL HPTIQELFIN CFELGHERPE LRPDAKAWLQ
GLRESEDSLV HCQKNHQHWY GNYLKSCPWC ARTKLLKGRD PFPSREAVRN KQHLEPALKK
GKLLPLKSPK ATPSQKPAPP KPIVITRPMG QYQPLLTPVV TKFKPPSLPI IPLPGGGKGL
LGIAQDAIFG GFWGVLLAAA VAGLVLGIVN SSIAILGGVV MGIFWGAFFA IACQYVIPMN
SSSASLGLTG GLWGGFLAAA ITGAVYGIGN RLGAFGQAVV LGGFLGTIWG SVWSYFKPPL
AFPVPGRVLG RRGLFLGVIW GAFLGTVIGA ILAGIFVFQE AMNDNSNSWD ELVSILISSM
ISAMGVGAMG GVIGGVILGP ILGAPTLPLS NNLSGARGAL LGGIWGCFLG TIIGIICGGF
LPQIVSIDLV EIMRVNGDWT SIFSTIFGAG LGALCGCFSG ATWGSMGKW