Gene Tery_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2820 
Symbol 
ID4245124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4384041 
End bp4384712 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content33% 
IMG OID638107872 
Producthypothetical protein 
Protein accessionYP_722469 
Protein GI113476408 
COG category[S] Function unknown 
COG ID[COG4340] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.130722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.950344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA TTTTAGAATC AATTAATTTA GATTATGCTT TTATGTTTAC TCATAAAAAA 
GTAAACTCAA TTAGCATGGA AGGTTTTGAT CCGTTTTTTG CCGACCTTCC TGTTGATCCC
TACATGAAAG CTAAGTATCG TTATAGAAGA CTTTCTCGTT TTATTCTCTC AGGGGAAAAA
GTAATAAAGC AGCCTCATGG TTATATTTTT CAAGGCAAAA ATTATAATCC TCTTCCAAAT
TATGGGGATG TTAAAAGAGA ATATGCTGAA ATAGATGATA AACTTGTTGC CTTAGACAAC
TTCAAAAAAA TGATTTTAGC CTTCTGTGAT TCCTGCAAAA TACATCCAGA AGCAGAAATT
GGAATACATC AAATTAGAAC TATTTGCTAC CCTAATAGTT TAGGTAATCC AGCACCAGAA
GGTATTCATC AAGATGGCAC AGATTTTATT GGTATATTTG TAGTGAATAG ACATAATATT
CAAGGGGGTG CAACTCATCT TTATACTGCT AAAAAAGAAA AGCCAGTATT TAGTAAAATT
CTCAATCCTG GAGATTTATT ACTGGCAAAT GACCATGAAT TTTTCCACTT TACCACTCCC
ATTAAACCTG TGATAGAAGA GATGGGATAT CGGGATGTCT TTGTGTTAAC TTCTCCTAGT
TTGATTCATT AA
 
Protein sequence
MQKILESINL DYAFMFTHKK VNSISMEGFD PFFADLPVDP YMKAKYRYRR LSRFILSGEK 
VIKQPHGYIF QGKNYNPLPN YGDVKREYAE IDDKLVALDN FKKMILAFCD SCKIHPEAEI
GIHQIRTICY PNSLGNPAPE GIHQDGTDFI GIFVVNRHNI QGGATHLYTA KKEKPVFSKI
LNPGDLLLAN DHEFFHFTTP IKPVIEEMGY RDVFVLTSPS LIH