| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2784 |
|---|
| Symbol | |
|---|
| ID | 4245318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 4318432 |
|---|
| End bp | 4319469 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638107841 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_722438 |
|---|
| Protein GI | 113476377 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.108617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0022307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA TAGATAAACT AAATGATTTT ATTAATCAAA CAAAAGAGTC TAAAGAAATT
AAAAGGGCCT TGGCCGTAAA AATGACCTTG TCAGGAAAAT CCTACCATGA AGTCAAAGAA
TTATTAAATG TTTCTCACAG TTTTATTAGT GAATGGAAAA ACCAAGCATT ATTTCATGGT
GTAGAAAGTT TAAGGCTTCA GTATCAAGGG AGACAAGGTT ACTTAAAAAC GGTCGAAAAA
GAGAAAACAA TTGAGTGGTT GAGAGCACAA GATTATCTTA GGTTATCAGA TTTAAAAAAC
TACTTACAGG AGCAATATGA TGTGGTTTTT GAGTCTAATC AAAGTTACTA TAACTTGTTT
AAAGAAGCGG GCATAAGTTG GAAAAAAACT CAAAAAAAGA ATCCTGCTAA AAATGATGAA
TTAGTAGAAG TTAAAAGAAA AGAAATAGAG GAATTTTTAG CTAAATGGCA ACCAGAAATA
GAAACTGGAA AGCTTACAGT GTTTATGATT GATGAATGTC ATCTTCTATG GGGAGACATA
TTAGGTTATG CTTGGGGAAA AACAGATGAA AGAATAGAAA TTGCAATTAA AAATGAAAAA
GAAAGACAGA CTTATTATGG AGCTTTAGAC TATAAAACCA AGGAATTTCT TGTGCAAGAA
TATGAGAGTG GAAATACTAA AAATACTATT GAATTTATTA AATATTTGCA GAAGCAAAGA
CCGGGCAACA AATTGGCAAT ATTTTGGGAT GGGGCAACTT ACCATAACTC TCAAGAATTT
CGAGAATATT TAATGACAAT TAATCAATAC TTATCAGAAG AAGAATTGTT GATAAATTGT
ACAAGATTTG CTCCCAATGC TCCGGAGCAA AATCCTGTTG AAGATATTTG GTTACAAACC
AAAAATTTCA GTATTACTTT TTATCATCTT TGCAGTTCTT TTAAAGTAGT TAAGTGGCTA
TTTAAGTTTT TTGCGGATGG TCAAATATTC AATTTCCCAA AACTTTTTCA GTATAAAATT
TTGCCGCAAC CTACTTAG
|
|---|
| Protein sequence | MNIIDKLNDF INQTKESKEI KRALAVKMTL SGKSYHEVKE LLNVSHSFIS EWKNQALFHG
VESLRLQYQG RQGYLKTVEK EKTIEWLRAQ DYLRLSDLKN YLQEQYDVVF ESNQSYYNLF
KEAGISWKKT QKKNPAKNDE LVEVKRKEIE EFLAKWQPEI ETGKLTVFMI DECHLLWGDI
LGYAWGKTDE RIEIAIKNEK ERQTYYGALD YKTKEFLVQE YESGNTKNTI EFIKYLQKQR
PGNKLAIFWD GATYHNSQEF REYLMTINQY LSEEELLINC TRFAPNAPEQ NPVEDIWLQT
KNFSITFYHL CSSFKVVKWL FKFFADGQIF NFPKLFQYKI LPQPT
|
|---|
| |