Gene Tery_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2780 
Symbol 
ID4245314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4314812 
End bp4315546 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content32% 
IMG OID638107837 
ProductABC transporter related 
Protein accessionYP_722434 
Protein GI113476373 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.410215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00175924 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAAGAGG ATAAATCACA AGCTGGAGTC TATGTTAAAA ACCTATTATT TCAATATTCT 
CAAAATGATC CTATTTTACA CAATCTTTCA TTGACAATTA AACCAGGGGA AAGAGTTGCT
TTATTAGGTT CTACGGGTAC AGGTAAAAGC ACTTTTATGG AAACTTTAGT AGGATTGAAA
AAAGCTTTAT CTGGTGAAAT TTGGATTCAA GGAATTCTCC TAGAACAAAA AACTTTATCT
CAAGTGCATA GTCAAATAGG TTTTTGTTTC CAAAATCCTG ATGACCAATT ATTTATGCCT
ACTATTTTAG AGGATATAAC TTTTGGTCCG CTTAACTATG GTTTACCCCT AGAAACTGCT
AAAGAAGTTG CTCAAAATTT GTTAGTAAAA TTTGGTTTAG AAAAATATGC ACATCGTTCT
GTTTATGAAC TTTCAGGAGG TCAAAAAAGA TTGGCAGCTT TAGCAGCAGT TTTAGCATTA
AAGCCAGAAA TTTTAATATT AGATGAACCA ACTAATGGCC TTGACCCTTT ATGGCGTCGC
AACTTAGCTG AAATTATTTT ACAATTACCA ATGCAAATTA TTTTAATTGC TTCTCATGAT
TTAAACTGGG TTAGCAAGGT AACTGAACGT GCTTTAATTT TACAGTATGG TCAAATTCAA
GTAGATACTT CTACGGAAAA TATTCTCCGA GATACTTCAA TTCTTGAATC CTATGATTTA
CCTTTTAATT ATTAA
 
Protein sequence
MQEDKSQAGV YVKNLLFQYS QNDPILHNLS LTIKPGERVA LLGSTGTGKS TFMETLVGLK 
KALSGEIWIQ GILLEQKTLS QVHSQIGFCF QNPDDQLFMP TILEDITFGP LNYGLPLETA
KEVAQNLLVK FGLEKYAHRS VYELSGGQKR LAALAAVLAL KPEILILDEP TNGLDPLWRR
NLAEIILQLP MQIILIASHD LNWVSKVTER ALILQYGQIQ VDTSTENILR DTSILESYDL
PFNY