Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2780 |
Symbol | |
ID | 4245314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4314812 |
End bp | 4315546 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638107837 |
Product | ABC transporter related |
Protein accession | YP_722434 |
Protein GI | 113476373 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.410215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00175924 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAAGAGG ATAAATCACA AGCTGGAGTC TATGTTAAAA ACCTATTATT TCAATATTCT CAAAATGATC CTATTTTACA CAATCTTTCA TTGACAATTA AACCAGGGGA AAGAGTTGCT TTATTAGGTT CTACGGGTAC AGGTAAAAGC ACTTTTATGG AAACTTTAGT AGGATTGAAA AAAGCTTTAT CTGGTGAAAT TTGGATTCAA GGAATTCTCC TAGAACAAAA AACTTTATCT CAAGTGCATA GTCAAATAGG TTTTTGTTTC CAAAATCCTG ATGACCAATT ATTTATGCCT ACTATTTTAG AGGATATAAC TTTTGGTCCG CTTAACTATG GTTTACCCCT AGAAACTGCT AAAGAAGTTG CTCAAAATTT GTTAGTAAAA TTTGGTTTAG AAAAATATGC ACATCGTTCT GTTTATGAAC TTTCAGGAGG TCAAAAAAGA TTGGCAGCTT TAGCAGCAGT TTTAGCATTA AAGCCAGAAA TTTTAATATT AGATGAACCA ACTAATGGCC TTGACCCTTT ATGGCGTCGC AACTTAGCTG AAATTATTTT ACAATTACCA ATGCAAATTA TTTTAATTGC TTCTCATGAT TTAAACTGGG TTAGCAAGGT AACTGAACGT GCTTTAATTT TACAGTATGG TCAAATTCAA GTAGATACTT CTACGGAAAA TATTCTCCGA GATACTTCAA TTCTTGAATC CTATGATTTA CCTTTTAATT ATTAA
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Protein sequence | MQEDKSQAGV YVKNLLFQYS QNDPILHNLS LTIKPGERVA LLGSTGTGKS TFMETLVGLK KALSGEIWIQ GILLEQKTLS QVHSQIGFCF QNPDDQLFMP TILEDITFGP LNYGLPLETA KEVAQNLLVK FGLEKYAHRS VYELSGGQKR LAALAAVLAL KPEILILDEP TNGLDPLWRR NLAEIILQLP MQIILIASHD LNWVSKVTER ALILQYGQIQ VDTSTENILR DTSILESYDL PFNY
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