Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2706 |
Symbol | |
ID | 4244969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4186226 |
End bp | 4186903 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638107769 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_722368 |
Protein GI | 113476307 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.122087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT TAGCAACTGT TACTTTTGTC ATTTCTTTCA TATACTTGAG TTTATCTGCG CCAATTATGG GAGCTAATTA TGAAGATGTT AATCATCTTT TAGAATATAA TTGGTGTGTA TCATTCTTAT GGAAACAATG TGACCTAACC AGAGCAAATT TTCATGACAT TAATTTAAAG AATGCTAATA TGTCGGGAGC TAATTTAACA GGGGTAAATT TCCAAGGTGC AGATTTAAAT GGAGCTAACC TTTCCGGAGC TAATTTAACA GGAGCTAATT TAGAAAAAGC TAACTTATAT AGAGCAGATA TCAACAGAGC AAATTTAACA AATACTAATT TAACTAGCAC TCGTTTATTA GAAGCTGATT TAACTCTAGC AAATTTAAAT CATGCTAATT TAACTGATGC TAATTTGTTA GAAGCAAGAC TCTGGGGAGC AAGTTTGGCA GGAGCTAATT TAAACAATGC TAGTCTTCAT GGTACTAACT TAGAATATGC TAATCTTGCT GATTCTAATT TAAGTGGAGC GGACTTTCAT AGTTTCTCTT TCAGAAGTTA TAAACAAGAA ACTAATTTAA GTAATGCTAA TTTGGAAGGT GCAATTATTA CTAATACAGA TTTAAGTGGA GTAATTATGA GGGGAACTAT TATGCCTGAT GGTTCAATTA ATGAGTAA
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Protein sequence | MKFLATVTFV ISFIYLSLSA PIMGANYEDV NHLLEYNWCV SFLWKQCDLT RANFHDINLK NANMSGANLT GVNFQGADLN GANLSGANLT GANLEKANLY RADINRANLT NTNLTSTRLL EADLTLANLN HANLTDANLL EARLWGASLA GANLNNASLH GTNLEYANLA DSNLSGADFH SFSFRSYKQE TNLSNANLEG AIITNTDLSG VIMRGTIMPD GSINE
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