Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2695 |
Symbol | recA |
ID | 4245190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4169525 |
End bp | 4170607 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638107758 |
Product | recombinase A |
Protein accession | YP_722357 |
Protein GI | 113476296 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.611822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00221105 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCTTCAG CTACAGATAA CAAAGAAAAA CAAAAAGCTT TAGATTCAGT CCTCAAAACC ATAGAAAAAA CTTTTGGTAA AGGGTCAATT GTCCGTTTGG GAGATGCTAC CCGCATGAAG GTAGAAACAA TCTCGAGTGG CGCACTTACC TTAGATTTGG CATTAGGAGG TGGCTTACCC AAGGGCAGAG TTATTGAAAT TTACGGACCA GAAAGTTCTG GAAAAACGAC TCTAGCATTA CATGCGATCG CCGAAACTCA GAAAAGTGGT GGTATAGCAG CTTTTGTAGA TGCAGAACAC GCTCTAGACC CTACTTATGC TGCTGCATTA GGAGTAGATA TTGAAAATTT ATTGGTCTCT CAACCTGATA CTGGAGAGAT GGCCTTAGAA GTAGTGGATC ATCTTGTTCG TTCTGTAGCT GTTGATATTG TGGTTGTTGA CTCGGTAGCA GCGTTAGTAC CTAGAGCTGA AATTGAGGGA GATATGGGAG ATTCTCACAT GGGTCTCCAA GCTCGTTTAA TGAGTCAAGC ACTACGGAAA ATTACAGGAA ATATTGGTAA ATCAGGTTGT ACAGTAGTTT TCCTCAACCA ACTTCGCCAA AAGATAGGTG TTGTTTATGG TAATCCAGAA ACTACTACTG GTGGTAATGC TCTTAAATTT TATGCTTCGG TTAGACTTGA TATTCGTCGC ACACAAACTC TCAAGAAATC TTCAGAGGAA TATGGTATTC ATGCTAAGGT CAAAGTTGCT AAGAATAAGG TCGCTCCTCC ATTCCGCGTA GCTGAATTTG ATATTATTTT TGGTAAAGGA ATTTCTAATG TCGGCTGTAT TATTGACTTA GCCGAAGAGA CAGATGTAAT TAAACGTAAA GGTGCTTGGT ATAGTTACCA AGGAAGTAAT TTTGCTCAAG GTCGAGAAAA AGCTATTGCT TATATGGAAT CTAATATTGA CTTTGCCAAA AAAATTGAAA AGCAAGTTCG AGATCATTTA AGTCAAGGTG CTTTGGTTTC TGCTAATTCT GTGGCACGGG TTGATGAGAT AGAAGAGGAT GAAGATGAGG ATGAAGCTCT AGAAGAAGAG TAA
|
Protein sequence | MASATDNKEK QKALDSVLKT IEKTFGKGSI VRLGDATRMK VETISSGALT LDLALGGGLP KGRVIEIYGP ESSGKTTLAL HAIAETQKSG GIAAFVDAEH ALDPTYAAAL GVDIENLLVS QPDTGEMALE VVDHLVRSVA VDIVVVDSVA ALVPRAEIEG DMGDSHMGLQ ARLMSQALRK ITGNIGKSGC TVVFLNQLRQ KIGVVYGNPE TTTGGNALKF YASVRLDIRR TQTLKKSSEE YGIHAKVKVA KNKVAPPFRV AEFDIIFGKG ISNVGCIIDL AEETDVIKRK GAWYSYQGSN FAQGREKAIA YMESNIDFAK KIEKQVRDHL SQGALVSANS VARVDEIEED EDEDEALEEE
|
| |