| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2694 |
|---|
| Symbol | |
|---|
| ID | 4245189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4166810 |
|---|
| End bp | 4167943 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638107757 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_722356 |
|---|
| Protein GI | 113476295 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0105564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA ATATTCCTTT CATTGACCTA AAATTACAAC ATCAACCACT AGAAAGTGAG
TTCAAAAAAT CAATTCAGGA AGTATTAGAA AGAGGAGACT TTATACTTGG TCAAGCAGTG
GCAAAGTTTG AATCCTCATT TGCTACAACT TGTGGAGTTG AAAATGCTAT TGGAGTTGCT
TGTGGCACAG ATGCTATAGC ACTTGGACTT CAAGCTTGTG GTGTTAGTGC AGGAGATGAG
GTAATTTTAC CAGCTAATAC ATTTATTGCT ACTTTAATAG GTGTACTTCA TACTGGTGCG
ACCCCAGTGC TAGTAGACTG CGATGAGGAA ACAGCATTAA TTGATTTAGA AATTGCTCAA
AAAGCTGTCA CAAACAAAAC TAAGGTAATA TTGCCAGTAC ATCTTTATGG TCAAATGGTA
GCTCCCAGTA AATTACTAGA CTTTGCTCAA GCTAATAAGC TCATTATATT TGAGGATGCA
GCTCAGGCTC ATTTGGCTCA AAGAGAAGGA TATCGTGCTG GAAGTATTGG AACTGCTGCT
GCATTTAGCT TTTATCCTAG TAAAAATTTA GGTTGTTTTG GGGATGGAGG TATGGTCGTT
ACTAGTGACC AAAAGGTAGC AAGTAAAATG CGAATGCTTC GTAATTATGG TGCTCCTCGT
AAATATGTCT ATGAGGAATT AGGTACTAAT AGTAGATTAG ATACTTTACA AGCAGCAGTA
CTAAATGTTA AGCTTCCTTA CTTGAAAGGT TGGAATAGCG ATCGCAACCA AGCAGCTCAA
AAATACGATA CCCTCCTCAG TCCGATGAAA GAGAAAGGTA TTATTCCGAT ACAGAATTTG
AGTGGTACTG GGCATATTTA TCATTTATAT GTGATTCGAA TTACTGACAA GTCTCCAATA
GACCGCGATA CTCTGAAAGA TAAATTAGGA GTAGCAGGAA TTTCTGTTGG TATCCATTAC
CCTATACCCT GTCATCTCCA ACCAGCTTAT CAACACTTAG GCTATAAAAA AGGAGATTTT
CCTAACAGTG AAACTCTGAG TCAACAGATT TTATCTTTAC CTATGTATCC TGTAATTAGT
GAAGAACAAA TTAATCTTGT TGTTGAGACA ATTATTCAAA TTATCAGTCA GTAA
|
|---|
| Protein sequence | MLKNIPFIDL KLQHQPLESE FKKSIQEVLE RGDFILGQAV AKFESSFATT CGVENAIGVA
CGTDAIALGL QACGVSAGDE VILPANTFIA TLIGVLHTGA TPVLVDCDEE TALIDLEIAQ
KAVTNKTKVI LPVHLYGQMV APSKLLDFAQ ANKLIIFEDA AQAHLAQREG YRAGSIGTAA
AFSFYPSKNL GCFGDGGMVV TSDQKVASKM RMLRNYGAPR KYVYEELGTN SRLDTLQAAV
LNVKLPYLKG WNSDRNQAAQ KYDTLLSPMK EKGIIPIQNL SGTGHIYHLY VIRITDKSPI
DRDTLKDKLG VAGISVGIHY PIPCHLQPAY QHLGYKKGDF PNSETLSQQI LSLPMYPVIS
EEQINLVVET IIQIISQ
|
|---|
| |