| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2657 |
|---|
| Symbol | |
|---|
| ID | 4245382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 4118496 |
|---|
| End bp | 4119104 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638107725 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_722324 |
|---|
| Protein GI | 113476263 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.752481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.637011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTT TAGAGGCAAT TTATCAGCGT CGCGCTATTA AAGGTTTTGA TCCTAACCAT
AAAATTACAG AAGATGATGA AAAAAAGCTT TTGGAAGCAA CAATTCAAGC TCCCACCAGT
TTTAATATTC AACATTGGCG TTTTGTTATT TTGCGAGATA CAGAATTACG ACAAAAGATT
CGAGAACTTG GTTTTGATCA AGCCCAAATG ACAGATGCTT CTTTACTCAT TCTTTTTACA
GCAGATATGA AAGCTTGGGG AAAAGGTGTT GAGCGCTATT GGAAAAATGC TCCAGAGCAA
GTCAGTAACA TGATGGTAGG TATGACAGGC GATTTCTATA AAGACCGTGA ATGGCTTCAA
CGAGATGAAG CTCAACGTTC AATTGGTATG GCAATGCAGA CTTTAATGTT AGCAGCAAAA
GCGATGGGTT ATGATTCCTG CCCGATGATT GGTTTTGATA TTGAAAAACT AGCAGAATTG
ATTAATTTAC CTGAAGATTA TGTAATAGGT CCTATGGTAG CTATTGGTAA AAAAGTTAAA
GACCCTTGGC CTAAACCAGG ACAATTACCA TTGGCAGAAT TAAAAGTTGA AAATCAGTTC
ACAAAATAA
|
|---|
| Protein sequence | MDTLEAIYQR RAIKGFDPNH KITEDDEKKL LEATIQAPTS FNIQHWRFVI LRDTELRQKI
RELGFDQAQM TDASLLILFT ADMKAWGKGV ERYWKNAPEQ VSNMMVGMTG DFYKDREWLQ
RDEAQRSIGM AMQTLMLAAK AMGYDSCPMI GFDIEKLAEL INLPEDYVIG PMVAIGKKVK
DPWPKPGQLP LAELKVENQF TK
|
|---|
| |