Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2631 |
Symbol | |
ID | 4245356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4072395 |
End bp | 4074116 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638107700 |
Product | hypothetical protein |
Protein accession | YP_722299 |
Protein GI | 113476238 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0940013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCAG CCAAAACTTT AACCACATTA ACCCCAGTCA AACTCTGGTT TTATCTCAGC CTCACCCTAG CCATAACCTG TGGAATTTTA GGAATAATTC CCGCCCTTAG TCATCAATAT ATAGTCCAAG ACGACGCCCG GTCCCACATC TTTTGGATGG CAAAATTTCT CAACCCCGAA CTTTTTCCCA ACGACATTAT TGCCGACTAT TTTCAATCAG TAGCCCCCCA AGGATATACC CACCTTTATA AACTATTTTC CCTCATCAAA ATTCCACCCT TATTACTAAA TAAAATCCTG CCAATAATAT TAGGATTAAT CACAACCGCC TACTGTTTCA AAGTAGCAAT ACAAATATTA CCCATCCCAC TCGCAGGATT TCTCAGTACA TTATTTTTAA ATCAAAATCT TTGGCTAAAA GACGACCTCA TCTCCGGCAC CCCCAGAGCA TTTTTCTATC CCTTATTCCT AGGATTTCTC CATTACTTCC TCAAAAAATC CTCCCTAGGA ATAATCATAA CAATTACCCT TCTAGGATTA TTTTATCCCC AAGGAGTTTT CCTCAGTGCC GCCCTCCTAA CCTTAGACTT TCTCCACCTC CCAAACCAAC AAAAACTCAC CATATTAACC ATAGGTTTAA CCACAGCATT CCTCATACTT TTACCCTACG CTTTAAACAC CTCCGAATAT AGCCCAATCA TTACATTAAC CCAAGCCAAA AAACTACCAG AATTTTTCCC CGGTGGTAGA GCATCCTTCT TTTCAAACAA CAACTTTGAC TTTTGGTTAA CAGGCGATCG CTCCGGCATT ATTCCTCCAG AATGGCTATC CCAATCTTTT CTTCCCCCCC AAGTTTGGGC AGGATTATTA TTATTCATTT TCTTAAGCTT CAACAAAAAA AATATAACCC AAAAAATCAC CAACAAAATA ATCCTTTTAC CAGAATTAGC CTTAGCATCA ACCGGAATAT TTATAGCCGC CCACCTATTA TTATTTCGAC TACATCATCC CAGTCGTTAC AGTCAACATA GCCTCAGAAT AATCATGGCT TTAGCAGGAG GAATAGCCTT CACATTAATC ATAGAATTAA TCAGAAAAAA GCTCCATCTC CTCAACAATT CATCCAAAAA CCAACCACTC CAAAAAATAA GAGCTATCTC CATATCTACA TCTATATATA TAGTATTAAC CTTAATTATT ATATATCCAG CCCTAACCAA CAACTTTCCC GTAACCAATT ATGTAGTCGG AAAAGCACCC CAACTTTATG AATATTTAGC CCAACAACCC TCAGATATTC GCATCGCCTC CTTAGCATTA GAAGCTAATA ATATTCCCAC ATTTGCCAAA CGTTCAATAT TAGTAAGTTC CGAATATGCT TTACCTTATC ACCAAGGATA TTATAATCAA ATCAAACAAC GAGCCAAAGA TTTAATCCAA GCCCAATATA GTCCGAACCT AGAAGAAGTC AAAAAAATTA TCCACAAATA TAAAATTGAC TTTTGGTTAT TAGATTCTCA AGCATTAACC TTAGAATATG TCAGAAAAAA CCATCGTCTT CAACAATTAA ATTATACCGC CGCCAACCTA GTTAAAAGTC AGATGGAAAA TGGCATAACT CCCACCTTAT TAAATGTGCC AGAAAAATGT CGAGTTCTAG ATATTCATAA CTTAGTTTTA CTAGAAGCAA AATGTATTTT AGGAGTAACT TCTAGTAATT AA
|
Protein sequence | MNPAKTLTTL TPVKLWFYLS LTLAITCGIL GIIPALSHQY IVQDDARSHI FWMAKFLNPE LFPNDIIADY FQSVAPQGYT HLYKLFSLIK IPPLLLNKIL PIILGLITTA YCFKVAIQIL PIPLAGFLST LFLNQNLWLK DDLISGTPRA FFYPLFLGFL HYFLKKSSLG IIITITLLGL FYPQGVFLSA ALLTLDFLHL PNQQKLTILT IGLTTAFLIL LPYALNTSEY SPIITLTQAK KLPEFFPGGR ASFFSNNNFD FWLTGDRSGI IPPEWLSQSF LPPQVWAGLL LFIFLSFNKK NITQKITNKI ILLPELALAS TGIFIAAHLL LFRLHHPSRY SQHSLRIIMA LAGGIAFTLI IELIRKKLHL LNNSSKNQPL QKIRAISIST SIYIVLTLII IYPALTNNFP VTNYVVGKAP QLYEYLAQQP SDIRIASLAL EANNIPTFAK RSILVSSEYA LPYHQGYYNQ IKQRAKDLIQ AQYSPNLEEV KKIIHKYKID FWLLDSQALT LEYVRKNHRL QQLNYTAANL VKSQMENGIT PTLLNVPEKC RVLDIHNLVL LEAKCILGVT SSN
|
| |