| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2589 |
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| Symbol | |
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| ID | 4244657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 3990853 |
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| End bp | 3992991 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638107660 |
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| Product | glycogen debranching enzyme, putative |
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| Protein accession | YP_722259 |
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| Protein GI | 113476198 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATAA GTTTTGAACG AGAAAATTGT AGTAATCTCA ACATAGCTGA GTCACAAGAA
TGGTTAGTCA CAAACGGAAT AGGAGGTTAC GCTTCCAGTA CCATAGCCCA ACTCCTAACT
CGTCGTTATC ACGGACTACT AATAGCAGCT CTCCAGCCCC CATTAGGACG TACACTACTA
CTAACAAAAT TAGACGAAAC GGCTAAATAT AAAAATCAAA ACTTCCCACT ATATTGTAAC
CGTTGGGCAA ACGGATCAAT AAATCCAGAA GGTTACAAAA AAGTCGAAAA ATTTTATCTA
GAAGGAACAA TAGCAGTATG GAAATTTAAA TTTGCGGACA TAGTATTAGA AAAACGAATC
TGGATGGAGC AAGGAGAAAA TACAACTTAC ATTCATTATA ACCTACGCAG TGGTAGCGAA
CCATTAAATT TAGTTATAAA AGCATTAATT AACCATAGAG AGCATCATGA TCATACCTAT
GCAAATAATG CAAATGACTG GTATATCAAC ATCAAGAAAG CTAACAAAGG GGTATGTGTA
CAACCTTTTC CTGAAGCTAC ACCCCTATAT CTACTGACAC ATCCTCAAAT AGACGAAAAA
ACCTTAGTAT GTACACATGC TAACAATTGG TATTACGGGT TTAACCTAGC AATAGAAAAA
TATCGGGGGC TAGAGGAAAT AGAAGACCAC CTAAACGCTA TCACCCTCAA TGCTCAATTA
GAAGTAGGAA AATCTCTAAC TATAGTTGCT AGCACAAAAG AAAATCCTAC TACTAATGGT
GAAGAAGCTT TAGCATCTCG TCTGGCTTAC GAACAAAAGA TCATACAAAA ATTTGCTAAC
CCTCAAATAT CCCAAGTACA ACAAAAAAAA ACAATTGATC CACTATCAAG TCCATCAAAA
ATATCAACCC AGAAAAAATC GATATCCTCT GCATCGATAT CCTCTGCTAA TGACAAAGGA
ACACCAGAAT GGATCAAGCA GTTAGTATTA GCAGCGAACC AATTTATAGT TGATCGCAAA
TCTCCTGAAC ATACAGAAGG GAAAACCATC ATTGCAGGTT ATCATTGGTT TCAAGACTGG
GGGCGAGATA CAATGATTAG CTTACCAGGT TTAACCATCT GTACAAAGCA ATTTGATGTA
GCACGTTCCA TTCTTCAAAC CTTTGCCAAA TATGTCAAAG AGGGAATGTT ACCTAACAAC
TTCCCAGAAA GTGGTGGAAC ACCAACTTAT AATACTGTAG ATACAACACT ATGGTATTTT
GAAGCCATTC GTGCGTATTA TGAAGCCACC GAAGATGACA AATTATTAGC ACAATTATTT
CCAGTACTAG AAGAAATTAT TGACTACTAT TCTAAAGGTA CTCGTTACAA CGTTAAGTTA
GATACTGATG ATGGTTTAAT CTTTGCTGGT GAACCAGGTA GTCAAATTAC TTGGATGGAT
GCCAAAGTTG ATAACTCGCC AGTAACAGCG CGTATTGGGA AACCAATTGA AATCAGTGCT
TTGTGGTATA ATGCTTTGCA AATCATGTAT AGGTTTGCCG AAAAGTTAAA GAAGAGAGAG
CTTAAGTACA AACAATTAAT AAGGTTGATC AAAGATAAAG GTTTTCCCCG TTTCTGGAAT
AATAAAAGTG GTTATTGTTA CGACGTCATA GATACACCTA GTGGTAATGA TGCTTCTTTG
CGACCTAATC AAATATTTGC TTTATCACTA CCACCAATAA GTCAAAAATA TAGTTATACT
CCCCTTCTGA CAGTAGAACA AGAAAAACAA GTGATGGAGA TATGCACTCA GAAGTTATTA
ACTCCCTATG GGTTACGCAG TCTTAGTAGT GATGATCCAG AGTATAAGGG TATTTATGGA
GGAGATATGG AGAAACGTGA TAGGGCCTAT CACCAAGGGA CTGTTTGGGG TTGGTTGATC
GGTAGTTATG TTATAGCCCA TTTACGAATT TATAAAGATC CAGTAAAAGC TAAAGAGTTA
TTGAAACCAA TGGAAAAACA TTTGATGGTG CATGGTATTG GTAGTATTAG CGAAATTTTT
GACGGTAATG AACCAACAAC ACCTCGTGGT TGTATTGCTC AAGCGTGGAG TGTTGCAGAA
GTTTTACGAG CTTGGTCACT CATTCATCAA GTTAGTTAA
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| Protein sequence | MVISFERENC SNLNIAESQE WLVTNGIGGY ASSTIAQLLT RRYHGLLIAA LQPPLGRTLL
LTKLDETAKY KNQNFPLYCN RWANGSINPE GYKKVEKFYL EGTIAVWKFK FADIVLEKRI
WMEQGENTTY IHYNLRSGSE PLNLVIKALI NHREHHDHTY ANNANDWYIN IKKANKGVCV
QPFPEATPLY LLTHPQIDEK TLVCTHANNW YYGFNLAIEK YRGLEEIEDH LNAITLNAQL
EVGKSLTIVA STKENPTTNG EEALASRLAY EQKIIQKFAN PQISQVQQKK TIDPLSSPSK
ISTQKKSISS ASISSANDKG TPEWIKQLVL AANQFIVDRK SPEHTEGKTI IAGYHWFQDW
GRDTMISLPG LTICTKQFDV ARSILQTFAK YVKEGMLPNN FPESGGTPTY NTVDTTLWYF
EAIRAYYEAT EDDKLLAQLF PVLEEIIDYY SKGTRYNVKL DTDDGLIFAG EPGSQITWMD
AKVDNSPVTA RIGKPIEISA LWYNALQIMY RFAEKLKKRE LKYKQLIRLI KDKGFPRFWN
NKSGYCYDVI DTPSGNDASL RPNQIFALSL PPISQKYSYT PLLTVEQEKQ VMEICTQKLL
TPYGLRSLSS DDPEYKGIYG GDMEKRDRAY HQGTVWGWLI GSYVIAHLRI YKDPVKAKEL
LKPMEKHLMV HGIGSISEIF DGNEPTTPRG CIAQAWSVAE VLRAWSLIHQ VS
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